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Included Properties

Data Type
  • ExperimentSetReplicate19
    • Dataset
  • FISH for DNA SPRITE19
    • Assay Details
    Set Type
  • Replicate19
    • Status
  • Released19
    • Warnings
    16 Common Properties
     Project
    4DN
     Lab
    Mitchell Guttman, CALTECH
     Experiment Category
    Microscopy
     Experiment Type
    FISH
     Organism
    Mouse
     Sample Type
    stem cells
     Sample Tier
    Unclassified
     Sample Category
    Mouse stem cell
     Sample
    F1 2-1 mESC line
     Organ/System
    No value
     Tissue Source
    stem cell
     Publication
    Quinodoz SA et al. (2018) doi:10.1016/j.cell.2018.05.024
     Modifications
    No value
     Treatments
    No value
     Center
    NBC - Guttman
     Commendations
    No value
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESGCPT17E
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr2 + Chr4 active regions + nuclear speckle
    Target
    Chromosomes, GRCm38:4:149075743-149626036 mouse region, GRCm38:2:29844332-30444626 mouse region, Srsf2 mouse protein
    Mitchell Guttman, CALTECH
    4DNESCXK9T73
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr18 inactive region + nuclear speckle
    Target
    Chromosomes, GRCm38:18:3004000-5000150 mouse region, Srsf2 mouse protein
    Mitchell Guttman, CALTECH
    4DNESSA7L379
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr18 control region + nucleolus + nuclear speckle
    Target
    Chromosomes, GRCm38:18:34840336-36830032 mouse region, Ncl mouse protein, Srsf2 mouse protein
    Mitchell Guttman, CALTECH
    4DNES51KYEOA
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr18 + Chr19 control regions + nucleolus + nuclear speckle
    Target
    GRCm38:19:44925701-46925611 mouse region, GRCm38:18:75840470-76761410 mouse region, Ncl mouse protein, Srsf2 mouse protein
    Mitchell Guttman, CALTECH
    4DNES22AZ9SR
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr11 control + active regions + nuclear speckle
    Target
    GRCm38:11:37358350-38186645 mouse region, GRCm38:11:117138538-118138747 mouse region, Srsf2 mouse protein
    Mitchell Guttman, CALTECH
    4DNESNXSJNNN
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr4 control region + nuclear speckle
    Target
    Chromosomes, GRCm38:4:90905971-92332751 mouse region, Srsf2 mouse protein
    Mitchell Guttman, CALTECH
    4DNESOXAMSOS
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr4 active region + nuclear speckle
    Target
    Chromosomes, GRCm38:4:149075743-149626036 mouse region, Srsf2 mouse protein
    Mitchell Guttman, CALTECH
    4DNESZF3ZMBB
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr2 + Chr11 active regions + nucleolus
    Target
    Chromosomes, GRCm38:11:117138538-118138747 mouse region, GRCm38:2:29844332-30444626 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNESMLCUEHI
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr2 active + Chr4 control regions + nucleolus
    Target
    Chromosomes, GRCm38:4:90905971-92332751 mouse region, GRCm38:2:29844332-30444626 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNESSDDZLRW
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr4 active region + nucleolus
    Target
    Chromosomes, GRCm38:4:149075743-149626036 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNES47ZKMEP
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr18 + Chr19 inactive regions + nucleolus
    Target
    Chromosomes, GRCm38:18:3004000-5000150 mouse region, GRCm38:19:17928145-19921671 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNESDUXWS3F
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr15 + Chr18 inactive regions + nucleolus
    Target
    Chromosomes, GRCm38:18:3004000-5000150 mouse region, GRCm38:15:4050417-6048847 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNESDWCJI59
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr12 + Chr19 inactive regions + nucleolus
    Target
    Chromosomes, GRCm38:12:5993048-6993343 mouse region, GRCm38:19:17928145-19921671 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNESS4EWNQJ
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr12 + Chr15 inactive regions + nucleolus
    Target
    Chromosomes, GRCm38:12:5993048-6993343 mouse region, GRCm38:15:4050417-6048847 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNESIHS4SRD
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr3 control + Chr19 inactive regions + nucleolus
    Target
    Chromosomes, GRCm38:3:153337160-154337181 mouse region, GRCm38:19:17928145-19921671 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNES1IC1QNZ
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr3 control + Chr15 inactive regions + nucleolus
    Target
    Chromosomes, GRCm38:3:153337160-154337181 mouse region, GRCm38:15:4050417-6048847 mouse region, Ncl mouse protein
    Mitchell Guttman, CALTECH
    4DNESK8RITYL
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr2 + Chr11 active regions
    Target
    Chromosomes, GRCm38:11:117138538-118138747 mouse region, GRCm38:2:29844332-30444626 mouse region
    Mitchell Guttman, CALTECH
    4DNESDLUOKC9
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr2 active + Chr4 control regions
    Target
    Chromosomes, GRCm38:4:90905971-92332751 mouse region, GRCm38:2:29844332-30444626 mouse region
    Mitchell Guttman, CALTECH
    4DNES9SOPPZV
    DNA FISH
    F1 2-1 mESC line
    FISH for DNA SPRITE
    Chr2 + Chr4 active regions
    Target
    Chromosomes, GRCm38:4:149075743-149626036 mouse region, GRCm38:2:29844332-30444626 mouse region
    Mitchell Guttman, CALTECH
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