Included Properties
Data Type
Dataset
Sample Category
Modifications
Treatments
Set Type
16 Common Properties
Project
4DN
Lab
Bing Ren, UCSD
Experiment Category
Sequencing
Experiment Type
Hi-C
Organism
Mouse
Sample Type
stem cells
Sample Tier
Tier 2
Sample
F123-CASTx129 (Tier 2)
Organ/System
No value
Tissue Source
stem cell
Publication
Kubo N et al. (2021) PMID:33398174
Assay Details
Enzyme: MboI
Center
NOFIC - Ren
Status
Released
Commendations
No value
Warnings
Biosample Metadata Incomplete
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
CTCF depleted by auxin treatment (0.5 mM, 96.0h)
Enzyme
MboI
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
CTCF depleted by auxin treatment (0.5 mM, 48.0h)
Enzyme
MboI
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
CTCF depleted by auxin treatment (0.5 mM, 24.0h)
Enzyme
MboI
in situ Hi-C
F123-CASTx129 (Tier 2)
Hi-C on CTCF-AID tagged F123-CASTx129
WT
Enzyme
MboI
- fin -