3 fewer sets in 4DN-only Data.
Included Properties
Data Type
Dataset
Treatments
Set Type
18 Common Properties
Project
External
Lab
Benoit Bruneau, UCSF
Experiment Category
Sequencing
Experiment Type
Hi-C
Organism
Mouse
Sample Type
stem cells
Sample Tier
Unclassified
Sample Category
Mouse stem cell
Sample
ES-E14TG2a with CTCF-AID
Organ/System
No value
Tissue Source
stem cell
Publication
Nora EP et al. (2017) PMID:28525758
Modifications
No value
Assay Details
Enzyme: HindIII
Center
External
Status
Released
Commendations
No value
Warnings
Biosample Metadata Incomplete
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Dilution Hi-C
ES-E14TG2a with CTCF-AID
Hi-C on CTCF-AID tagged mESCs
CTCF-depletion by auxin treatment followed by 24h wash-off
Enzyme
HindIII
Dilution Hi-C
ES-E14TG2a with CTCF-AID
Hi-C on CTCF-AID tagged mESCs
CTCF-depleted by auxin treatment
Enzyme
HindIII
Dilution Hi-C
ES-E14TG2a with CTCF-AID
Hi-C on CTCF-AID tagged mESCs
WT - untreated
Enzyme
HindIII
- fin -