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Included Properties

Data Type
  • ExperimentSetReplicate19
  • Experiment Set19
    • Dataset
  • Hi-C on lympoblastoid cell lines from 1000G individuals19
  • Immunofluorescence on synchronyzed HeLa cells135
  • No value98
  • DNA FISH on Chr1771
  • DNA FISH on Chr470
  • Hi-C on RAD21-AID tagged HCT-11658
  • DNA FISH on Chr152
  • SPT on U2OS cells for Spot-On analysis45
  • DNA FISH on Chr1838
  • SPT for GAGA transcription factor30
    • View 90 More913
    Sample
    Set Type
  • Replicate19
    • 18 Common Properties
     Project
    4DN
     Lab
    Bing Ren, UCSD
     Experiment Category
    Sequencing
     Experiment Type
    Hi-C
     Organism
    Human
     Sample Type
    immortalized cells
     Sample Tier
    Unclassified
     Sample Category
    1000 genomes/Hap Map
     Organ/System
    immune system
     Tissue Source
    B-lymphocyte
     Publication
    Gorkin DU et al. (2019) PMID:31779666
     Modifications
    No value
     Treatments
    No value
     Assay Details
    Enzyme: HindIII
     Center
    NOFIC - Ren
     Status
    Released
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESDYFTSG5
    Dilution Hi-C
    GM19204
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19204
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESG9UPQLY
    Dilution Hi-C
    GM19193
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19193
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESOHWXJQY
    Dilution Hi-C
    GM19141
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19141
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESQK7WJLT
    Dilution Hi-C
    GM19099
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19099
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNES3HQPSLM
    Dilution Hi-C
    GM18522
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18522
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNES3IV77UJ
    Dilution Hi-C
    GM18516
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18516
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESZIREYB8
    Dilution Hi-C
    GM18508
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18508
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESQXAEPXP
    Dilution Hi-C
    GM18507
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18507
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESAZRVEQ8
    Dilution Hi-C
    GM18505
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18505
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNES1H2O6N7
    Dilution Hi-C
    GM18486
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM18486
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESE3ICNE1
    Dilution Hi-C
    HG00514
    Hi-C on lympoblastoid cell lines from 1000G individuals
    HG00514
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESJIYRA44
    Dilution Hi-C
    HG00513
    Hi-C on lympoblastoid cell lines from 1000G individuals
    HG00513
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNES4GSP9S4
    Dilution Hi-C
    HG00512
    Hi-C on lympoblastoid cell lines from 1000G individuals
    HG00512
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESTAPSPUC
    Dilution Hi-C
    HG00733
    Hi-C on lympoblastoid cell lines from 1000G individuals
    HG00733
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESI2UKI7P
    Dilution Hi-C
    HG00732
    Hi-C on lympoblastoid cell lines from 1000G individuals
    HG00732
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESJ1VX52C
    Dilution Hi-C
    HG00731
    Hi-C on lympoblastoid cell lines from 1000G individuals
    HG00731
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESHGL976U
    Dilution Hi-C
    GM19240
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19240
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESVKLYDOH
    Dilution Hi-C
    GM19239
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19239
    Enzyme
    HindIII
    Bing Ren, UCSD
    4DNESYUYFD6H
    Dilution Hi-C
    GM19238
    Hi-C on lympoblastoid cell lines from 1000G individuals
    GM19238
    Enzyme
    HindIII
    Bing Ren, UCSD
    - fin -