9 fewer sets in 4DN-only Data.
Included Properties
Data Type
Dataset
Organ/System
Treatments
Set Type
Warnings
16 Common Properties
Project
External
Lab
Job Dekker, UMMS
Experiment Category
Sequencing
Experiment Type
Hi-C
Organism
Chicken
Sample Type
immortalized cells
Sample Tier
Unclassified
Sample Category
Other
Sample
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
Tissue Source
bursa of Fabricius
Publication
Gibcus JH et al. (2018) PMID:29348367
Modifications
No value
Assay Details
Enzyme: HindIII
Center
External
Status
Released
Commendations
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
prometaphase (15m)
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
prophase (5m)
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
prometaphase block (60m)
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
prometaphase block (30m)
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
prometaphase (30m)
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
prophase (10m)
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
G2 block
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
G2 block, elutriated
Enzyme
HindIII
Dilution Hi-C
DT40 with random integration of X. laevis Cdk1, CDK1 disruption
HiC on sync. chicken cells
unsorted, unsynchronized
Enzyme
HindIII
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