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Included Properties

Data Type
  • ExperimentSetReplicate8
    • Dataset
  • nascent transcript RNA FISH - flavopiridol treatment8
    • Assay Details
    Set Type
  • Replicate8
    • Status
  • Released8
    • 17 Common Properties
     Project
    4DN
     Lab
    Arjun Raj, UPENN
     Experiment Category
    Microscopy
     Experiment Type
    FISH
     Organism
    Mouse
     Sample Type
    stem cells
     Sample Tier
    Unclassified
     Sample Category
    Mouse stem cell
     Sample
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
     Organ/System
    No value
     Tissue Source
    stem cell
     Publication
    Bartman CR et al. (2018) PMID:30554946
     Modifications
    No value
     Treatments
    Chemical
     Center
    NT - Raj
     Commendations
    No value
     Warnings
    Biosample Metadata Incomplete
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESD7X1EDQ
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    prdx2, slc25a37 probes, 1000nM flavo
    Target
    Chromosomes, GRCm38:8:84969622-84974811 mouse region, GRCm38:14:69241851-69285103 mouse region
    Arjun Raj, UPENN
    4DNES4YC122Q
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    prdx2, slc25a37 probes, 100nM flavo
    Target
    Chromosomes, GRCm38:8:84969622-84974811 mouse region, GRCm38:14:69241851-69285103 mouse region
    Arjun Raj, UPENN
    4DNES1YEE93B
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    prdx2, slc25a37 probes, 10nM flavo
    Target
    Chromosomes, GRCm38:8:84969622-84974811 mouse region, GRCm38:14:69241851-69285103 mouse region
    Arjun Raj, UPENN
    4DNESBZLH7LF
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    prdx2, slc25a37 probes, control
    Target
    Chromosomes, GRCm38:8:84969622-84974811 mouse region, GRCm38:14:69241851-69285103 mouse region
    Arjun Raj, UPENN
    4DNESRQ869WB
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    hbb-b1, tal1, slc4a1 probes, 1000nM flavopiridol
    Target
    Chromosomes, GRCm38:7:103826534-103827928 mouse region, GRCm38:4:115056426-115071755 mouse region, GRCm38:11:102348820-102365281 mouse region
    Arjun Raj, UPENN
    4DNES5NP8XVF
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    hbb-b1, tal1, slc4a1 probes, 100nM flavopiridol
    Target
    Chromosomes, GRCm38:7:103826534-103827928 mouse region, GRCm38:4:115056426-115071755 mouse region, GRCm38:11:102348820-102365281 mouse region
    Arjun Raj, UPENN
    4DNESJMD4ELD
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    hbb-b1, tal1, slc4a1 probes, 10nM flavopiridol
    Target
    Chromosomes, GRCm38:7:103826534-103827928 mouse region, GRCm38:4:115056426-115071755 mouse region, GRCm38:11:102348820-102365281 mouse region
    Arjun Raj, UPENN
    4DNESWNV4PVW
    RNA FISH
    G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
    nascent transcript RNA FISH - flavopiridol treatment
    hbb-b1, tal1, slc4a1 probes, control
    Target
    Chromosomes, GRCm38:7:103826534-103827928 mouse region, GRCm38:4:115056426-115071755 mouse region, GRCm38:11:102348820-102365281 mouse region
    Arjun Raj, UPENN
    - fin -