ExperimentSetReplicate

ExperimentSet4DNES1K6FJTP
released
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DNA Paint on HFF Htert cells with 3 loci

   August 3rd, 2018 at 1:11pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:4:153347384-153505952 region, GRCh38:4:153155365-153328553 region, GRCh38:4:153567330-153719454 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:4:153347384-153505952 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:4:153155365-153328553 region targeted by Alexa Fluor 488-labeled BAC
ch03
GRCh38:4:153567330-153719454 region targeted by Cy5-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES1K6FJTP
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEX52QROGC
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFICO3X2QC
loci distances (txt)
17.16 kB
Experiment
4DNEXTB4W21X
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIQZHIJ4R
loci distances (txt)
15.12 kB
Experiment
4DNEX5HABJ2X
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFISJOKYP9
loci distances (txt)
14.03 kB