ExperimentSetReplicate

ExperimentSet4DNES22AZ9SR
released
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FISH/IF of Chromosome 11-Control and Chromosome 11-Active and Nuclear Speckle

   May 5th, 2018 at 4:05am
Source Publication
Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Quinodoz SA, Ollikainen N, et al., Cell 2018

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
F1 2-1 mESC line
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: GRCm38:11:37358350-38186645 mouse region, GRCm38:11:117138538-118138747 mouse region, Srsf2 mouse protein
Sample Image 
DNA FISH and anti-SC35 IF
View File Item - 4DNFIXXZFENZ
Channel
Path
 
ch00
GRCm38:11:37358350-38186645 mouse region targeted by 429/470nm fluorophore-labeled oligo probe set
ch01
GRCm38:11:117138538-118138747 mouse region targeted by 495/517nm fluorophore-labeled oligo probe set
ch02
Srsf2 mouse protein targeted by mouse anti-SC35 antibody (with DyLight650-labeled anti-mouse secondary antibody)

2 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXV4YS9V2
Bio Rep 1, Tec Rep 1
DNA FISH on F1 2-1 mESC line
File
4DNFIXXXP46H
locus distances, submitter format (csv)
2.21 kB
File
4DNFIYWV35SU
locus distances, submitter format (csv)
2.2 kB