ExperimentSetReplicate

ExperimentSet4DNES2PUZHGV
released
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DNA Paint on HFF Htert cells with 3 loci

   August 13th, 2018 at 4:06pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:97025755-97207860 region, GRCh38:1:118815746-118989848 region, GRCh38:1:105256970-105427280 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:97025755-97207860 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:118815746-118989848 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:105256970-105427280 region targeted by Alexa Fluor 488-labeled BAC

7 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES2PUZHGV
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXKP6ZJQJ
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
File
4DNFI81VY5RP
loci distances (txt)
165.11 kB
Experiment
4DNEX2S4NC9B
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
File
4DNFIUEOL57Y
loci distances (txt)
130.22 kB
Experiment
4DNEXDZQF1MQ
Bio Rep 1, Tec Rep 6
DNA FISH on HFF-hTERT
File
4DNFIRHWP3QW
loci distances (txt)
140.51 kB
Experiment
4DNEXFEEOABG
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFICKU7I58
loci distances (txt)
104.55 kB
Experiment
4DNEXGSTGTEC
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIZBL4MKL
loci distances (txt)
77.55 kB
Experiment
4DNEXMV24L5N
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFI6FTUEG6
loci distances (txt)
86.34 kB