ExperimentSetReplicate

ExperimentSet4DNES3O61A7Y
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DNA Paint on HFF Htert cells with 3 loci

   August 8th, 2018 at 1:34pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:17:63767294-63927790 region, GRCh38:17:65509811-65678200 region, GRCh38:17:38743489-38939529 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:17:63767294-63927790 region targeted by Cy5-labeled BAC
ch02
GRCh38:17:65509811-65678200 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:17:38743489-38939529 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES3O61A7Y
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXC18NAE2
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIJ8Z9I83
loci distances (txt)
152.8 kB
Experiment
4DNEXK8UZR29
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFICGCSGYP
loci distances (txt)
111.91 kB
Experiment
4DNEXSL9W96S
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIPBQQ1EU
loci distances (txt)
129.01 kB