ExperimentSetReplicate

ExperimentSet4DNES5T7JDHC
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DNA Paint on HFF Htert cells with 3 loci

   November 27th, 2018 at 11:03pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:18:73778050-73945077 region, GRCh38:18:46316193-46486760 region, GRCh38:18:22075002-22239510 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:18:73778050-73945077 region targeted by Cy5-labeled BAC
ch02
GRCh38:18:46316193-46486760 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:18:22075002-22239510 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES5T7JDHC
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXK1KJS34
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIW3585PX
loci distances (txt)
7.05 kB
Experiment
4DNEXPWMA7RI
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIRALYWHC
loci distances (txt)
15.53 kB
Experiment
4DNEXSP68PHA
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIY7E8JHQ
loci distances (txt)
15.34 kB