ExperimentSetReplicate

ExperimentSet4DNES7J7L5EQ
released
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DNA Paint on HFF Htert cells with 3 loci

   August 17th, 2018 at 4:41pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:63059760-63224942 region, GRCh38:1:22223362-22394657 region, GRCh38:1:12708719-12865743 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:63059760-63224942 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:22223362-22394657 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:12708719-12865743 region targeted by Alexa Fluor 488-labeled BAC

7 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES7J7L5EQ
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEX2GPPN6U
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
File
4DNFIRUHMF6J
loci distances (txt)
149.41 kB
Experiment
4DNEXQT1DEMJ
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
File
4DNFIXXI6CMZ
loci distances (txt)
161.58 kB
Experiment
4DNEXUXU2WBG
Bio Rep 1, Tec Rep 6
DNA FISH on HFF-hTERT
File
4DNFID5OB4NU
loci distances (txt)
111.06 kB
Experiment
4DNEXF1VKFKQ
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIIV763RF
loci distances (txt)
197.29 kB
Experiment
4DNEX3JTKH2C
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIZLN69KX
loci distances (txt)
199.85 kB
Experiment
4DNEXFE1FZUG
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIND4BPSK
loci distances (txt)
148.58 kB