ExperimentSetReplicate

ExperimentSet4DNES7QD33VK
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DNA Paint on HFF Htert cells with 3 loci

   August 8th, 2018 at 1:10pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:18:22075002-22239510 region, GRCh38:18:2535851-2706101 region, GRCh38:18:41537838-41727804 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:18:22075002-22239510 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:18:2535851-2706101 region targeted by Alexa Fluor 488-labeled BAC
ch03
GRCh38:18:41537838-41727804 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES7QD33VK
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXQKHY7QW
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIO1R2YC5
loci distances (txt)
103.08 kB
Experiment
4DNEXM8PM15A
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIAM2EFP5
loci distances (txt)
90.56 kB
Experiment
4DNEXTVAG7RV
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFI4SB3JXO
loci distances (txt)
98.25 kB