ExperimentSetReplicate

ExperimentSet4DNES9L6TRQN
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DNA Paint on HFF Htert cells with 3 loci

   August 8th, 2018 at 1:34pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:17:9734635-9900986 region, GRCh38:17:21275223-21478206 region, GRCh38:17:69261617-69425619 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:17:9734635-9900986 region targeted by Cy5-labeled BAC
ch02
GRCh38:17:21275223-21478206 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:17:69261617-69425619 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNES9L6TRQN
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXHRLNOZW
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFI316AF8F
loci distances (txt)
63.21 kB
Experiment
4DNEXGHUB7AJ
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIH4ZZWVE
loci distances (txt)
76.67 kB
Experiment
4DNEX9RIAKLZ
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIQY16HWF
loci distances (txt)
94.7 kB