ExperimentSetReplicate

ExperimentSet4DNESBUS47G2
released
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Dam_only DamID of HCT116 Tier 2 cells – cells were transduced with virus expressing Dam, gDNA was harvested after 4 days and processed for DamID-seq

   October 22nd, 2018 at 4:55pm

Data Usage Guidelines  

Data Use Guidelines: This is a data set generated by the 4DN Network and made freely available to the scientific community. If you are intending to use these data for a publication, we ask that you please contact the data generating lab to discuss possible coordinated publication. In your manuscript, please cite the 4DN White Paper (doi:10.1038/nature23884) and the 4DN Data Portal paper (doi:10.1038/s41467-022-29697-4), and please acknowledge the 4DN lab which generated the data. Please direct any questions to the Data Coordination and Integration Center.

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HCT116 (Tier 2)
Experiment Type(s) 
DamID-seq
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: None (Control)

4 Processed Files

Experiment
File
File Type
File Size
Notes
Experiment
4DNEXQMG43UY
Bio Rep 1, Tec Rep 1
DamID-seq on HCT116 (Tier 2)
File
4DNFIWVQTIJW
alignments (bam)
224.64 MB
File
4DNFI9XJQPIZ
alignments (bam)
1.21 GB
Experiment
4DNEX74KV3CW
Bio Rep 2, Tec Rep 1
DamID-seq on HCT116 (Tier 2)
File
4DNFICOB3EU7
alignments (bam)
315.11 MB
File
4DNFIH23XXKW
alignments (bam)
1.13 GB