ExperimentSetReplicate

ExperimentSet4DNESGOOHUGJ
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RNA FISH of Zfpm1 and Slc25a37 intronic regions in G1E-ER4 cells differentiated for 24 hours treated for 60min with 250nM JQ1

   September 14th, 2018 at 4:59pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Target: Chromosomes, GRCm38:8:122282141-122337247 mouse region, GRCm38:14:69241851-69285103 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:8:122282141-122337247 mouse region targeted by Alexa Fluor 594-labeled custom oligos
ch02
GRCm38:14:69241851-69285103 mouse region targeted by Cy3-labeled custom oligos

8 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEXUBOW1HO
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIHRJGWKK
csv
65.29 kB
File
4DNFILVNK276
coordinates (csv)
22.02 kB
File
4DNFIN3YN57V
csv
28.89 kB
File
4DNFI89Y65LQ
coordinates (csv)
6.77 kB
Experiment
4DNEXVCHRBJX
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIXJZ9IHI
csv
34.99 kB
File
4DNFIS1AMM23
coordinates (csv)
11.16 kB
File
4DNFIEODDN1Y
csv
18.9 kB
File
4DNFIMDB12JO
coordinates (csv)
5.29 kB