ExperimentSetReplicate

ExperimentSet4DNESKAMX5XP
released
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DNA Paint on HFF Htert cells with 3 loci

   August 8th, 2018 at 1:34pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:17:9734635-9900986 region, GRCh38:17:21275223-21478206 region, GRCh38:17:38743489-38939529 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:17:9734635-9900986 region targeted by Cy5-labeled BAC
ch02
GRCh38:17:21275223-21478206 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:17:38743489-38939529 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESKAMX5XP
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEX62PW5FW
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIFIICQN3
loci distances (txt)
155.27 kB
Experiment
4DNEXT22PUOD
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIWMAAI9D
loci distances (txt)
243.19 kB
Experiment
4DNEXO81M96A
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFILEVLTV6
loci distances (txt)
210.2 kB