ExperimentSetReplicate

ExperimentSet4DNESKIV62TK
released
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DNA Paint on HFF Htert cells with 3 loci

   November 27th, 2018 at 11:02pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:18:46316193-46486760 region, GRCh38:18:40596626-40761745 region, GRCh38:18:75525179-75695249 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:18:46316193-46486760 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:18:40596626-40761745 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:18:75525179-75695249 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESKIV62TK
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXDKD54PL
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIUMF25KP
loci distances (txt)
42.68 kB
Experiment
4DNEXIVP2OFE
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFITV1COGQ
loci distances (txt)
37.83 kB
Experiment
4DNEXJZ951D2
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFI6LIJ8R1
loci distances (txt)
62.34 kB