ExperimentSetReplicate

ExperimentSet4DNESKZKDJP1
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DNA Paint on HFF Htert cells with 3 loci

   August 17th, 2018 at 4:41pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:63059760-63224942 region, GRCh38:1:61560943-61746906 region, GRCh38:1:12708719-12865743 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:63059760-63224942 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:61560943-61746906 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:12708719-12865743 region targeted by Alexa Fluor 488-labeled BAC

13 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESKZKDJP1
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXKWQ3WRI
Bio Rep 1, Tec Rep 7
DNA FISH on HFF-hTERT
File
4DNFII9E9HVG
loci distances (txt)
82.38 kB
Experiment
4DNEX9FCFKAC
Bio Rep 1, Tec Rep 8
DNA FISH on HFF-hTERT
File
4DNFI9R8WLWT
loci distances (txt)
75.55 kB
Experiment
4DNEXFOHKFBV
Bio Rep 1, Tec Rep 9
DNA FISH on HFF-hTERT
File
4DNFIXTIJO9T
loci distances (txt)
92.45 kB
Experiment
4DNEXV7KVOSL
Bio Rep 1, Tec Rep 10
DNA FISH on HFF-hTERT
File
4DNFIS1O76MQ
loci distances (txt)
82.62 kB
Experiment
4DNEXZYRAT4T
Bio Rep 1, Tec Rep 11
DNA FISH on HFF-hTERT
File
4DNFI6QVBDGR
loci distances (txt)
92.76 kB
Experiment
4DNEX552TN1V
Bio Rep 1, Tec Rep 12
DNA FISH on HFF-hTERT
File
4DNFIBWEA69F
loci distances (txt)
102.11 kB
Experiment
4DNEXTA57GOX
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIQZPAUA2
loci distances (txt)
97.3 kB
Experiment
4DNEX8CMIFTF
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIE8IBD2M
loci distances (txt)
97.52 kB
Experiment
4DNEX7PQRRRI
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIUCHAJCX
loci distances (txt)
123.85 kB
Experiment
4DNEXPHPNSIV
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
File
4DNFIR337JK7
loci distances (txt)
120.98 kB
Experiment
4DNEXUMSFB41
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
File
4DNFIPOII7YA
loci distances (txt)
111.29 kB
Experiment
4DNEX9KHR6N7
Bio Rep 1, Tec Rep 6
DNA FISH on HFF-hTERT
File
4DNFIPDLUN3C
loci distances (txt)
106.87 kB
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