ExperimentSetReplicate

ExperimentSet4DNESN6T8849
released
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RNA FISH of Slc25a37 intronic and exonic regions in wt G1-ER4 cells from Jian Xu lab differentiated for 24 hours

   September 14th, 2018 at 4:58pm
Source Publication
Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation.
Bartman CR, Hamagami N, et al., Molecular cell 2018

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
Experiment Type(s) 
RNA FISH
Modification Type 
None
Treatment Type 
Chemical
Assay Details 
Target: Chromosomes, GRCm38:14:69241851-69285103 mouse region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:14:69241851-69285103 mouse region targeted by Cy5-labeled custom oligos
ch02
GRCm38:14:69241851-69285103 mouse region targeted by Cy3-labeled custom oligos

9 Processed Files

Experiment
File
File Type
File Size
Experiment
4DNEX2BH9QYK
Bio Rep 1, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFI4GT7C39
csv
1.67 kB
File
4DNFISYLOTYQ
csv
26.44 kB
File
4DNFIVF9ICQ2
coordinates (csv)
8.15 kB
Experiment
4DNEX86DEVMG
Bio Rep 2, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIYKSFE55
csv
1.69 kB
File
4DNFIADQJBZ5
csv
29.34 kB
File
4DNFIOEIEDFI
coordinates (csv)
8.13 kB
Experiment
4DNEXDZYWVMY
Bio Rep 3, Tec Rep 1
RNA FISH on G1E-ER4 with random integration of ER-responsive GATA-1, GATA-1 gene deletion
File
4DNFIZ641I17
csv
1.65 kB
File
4DNFIUHFJYDY
csv
27.14 kB
File
4DNFI812CKZ7
coordinates (csv)
6.65 kB