ExperimentSetReplicate

ExperimentSet4DNESOFG9YB8
released
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DNA Paint on HFF Htert cells with 3 loci

   August 13th, 2018 at 4:06pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:93528777-93687930 region, GRCh38:1:118815746-118989848 region, GRCh38:1:105256970-105427280 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:93528777-93687930 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:118815746-118989848 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:105256970-105427280 region targeted by Alexa Fluor 488-labeled BAC

6 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESOFG9YB8
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEX7LTG785
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
File
4DNFIV41D3E4
loci distances (txt)
82.76 kB
Experiment
4DNEXWFLCIEI
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
File
4DNFIDUTTDRW
loci distances (txt)
78.9 kB
Experiment
4DNEX3R5YF1M
Bio Rep 1, Tec Rep 6
DNA FISH on HFF-hTERT
File
4DNFI93LXZIE
loci distances (txt)
97.26 kB
Experiment
4DNEX3EKMK5S
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIGKTFFXH
loci distances (txt)
76.27 kB
Experiment
4DNEXQ9RCSOS
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIWCZAM2V
loci distances (txt)
67.13 kB
Experiment
File
File Type
File Size
Experiment
4DNEX8SSCZGP
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
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