ExperimentSetReplicate

ExperimentSet4DNESRDFFJ5A
released
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DNA Paint on HFF Htert cells with 3 loci

   August 17th, 2018 at 4:41pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:109469002-109662490 region, GRCh38:1:61560943-61746906 region, GRCh38:1:12708719-12865743 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:109469002-109662490 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:61560943-61746906 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:12708719-12865743 region targeted by Alexa Fluor 488-labeled BAC

7 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESRDFFJ5A
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXNKI9LUY
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
File
4DNFIKX9ODH5
loci distances (txt)
130.86 kB
Experiment
4DNEXKRNXMIS
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
File
4DNFIPSKKW8Z
loci distances (txt)
120.79 kB
Experiment
4DNEXLYRZ79U
Bio Rep 1, Tec Rep 6
DNA FISH on HFF-hTERT
File
4DNFITXNRPRO
loci distances (txt)
146.18 kB
Experiment
4DNEX65IMJ8T
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIRRPHYQS
loci distances (txt)
129.29 kB
Experiment
4DNEXPX7DUGS
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIYP68UH6
loci distances (txt)
155.83 kB
Experiment
4DNEXGUPX5O8
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIW5JRG17
loci distances (txt)
110.14 kB