ExperimentSetReplicate

ExperimentSet4DNESRYEHAIM
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DNA Paint on HFF Htert cells with 3 loci

   November 27th, 2018 at 11:02pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:18:75525179-75695249 region, GRCh38:18:62276743-62456847 region, GRCh38:18:2535851-2706101 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:18:75525179-75695249 region targeted by Cy5-labeled BAC
ch02
GRCh38:18:62276743-62456847 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:18:2535851-2706101 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESRYEHAIM
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXR5C44R9
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFICCVE16W
loci distances (txt)
39.67 kB
Experiment
4DNEXIHXAURO
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIPD6BAHN
loci distances (txt)
34.28 kB
Experiment
4DNEX11KN4KX
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIFOX661P
loci distances (txt)
28.19 kB