ExperimentSetReplicate

ExperimentSet4DNESS1VFR99
released
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DNA Paint on HFF Htert cells with 3 loci

   August 13th, 2018 at 4:06pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:22223362-22394657 region, GRCh38:1:20012369-20177632 region, GRCh38:1:12708719-12865743 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:22223362-22394657 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:20012369-20177632 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:12708719-12865743 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESS1VFR99
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXHZGFODS
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
File
4DNFIY8XM2L7
loci distances (txt)
154.92 kB
Experiment
4DNEX5S9LR64
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
File
4DNFIOE4YCWY
loci distances (txt)
190.98 kB
Experiment
4DNEXSCKZSHR
Bio Rep 1, Tec Rep 6
DNA FISH on HFF-hTERT
File
4DNFIAHUZF9H
loci distances (txt)
172.84 kB
Experiment
File
File Type
File Size
Experiment
4DNEXBUFUZTI
Bio Rep 1, Tec Rep 4
DNA FISH on HFF-hTERT
-
-
-
Experiment
4DNEXRBBPTOW
Bio Rep 1, Tec Rep 5
DNA FISH on HFF-hTERT
-
-
-
Experiment
4DNEX1EN6AWG
Bio Rep 1, Tec Rep 6
DNA FISH on HFF-hTERT
-
-
-