ExperimentSetReplicate

ExperimentSet4DNESUTAOST5
released
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DNA Paint on HFF Htert cells with 3 loci

   August 16th, 2018 at 4:44pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:1:89759075-89913486 region, GRCh38:1:97025755-97207860 region, GRCh38:1:105256970-105427280 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:1:89759075-89913486 region targeted by Cy5-labeled BAC
ch02
GRCh38:1:97025755-97207860 region targeted by Alexa Fluor 568-labeled BAC
ch03
GRCh38:1:105256970-105427280 region targeted by Alexa Fluor 488-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESUTAOST5
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEXZ1JBZAD
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFIYEJG87D
loci distances (txt)
66.97 kB
Experiment
4DNEX55G61SK
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFIBMRNTX2
loci distances (txt)
126.45 kB
Experiment
4DNEX2H3FTG2
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIL92D5AD
loci distances (txt)
104.38 kB