ExperimentSetReplicate

ExperimentSet4DNESUZM62NC
released
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DNA Paint on HFF Htert cells with 3 loci

   August 3rd, 2018 at 1:11pm
Source Publication
Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Finn EH, Pegoraro G, et al., Cell 2019

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
H. sapiens
Sample Type 
immortalized cells
Sample 
HFF-hTERT
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCh38:4:55367316-55516239 region, GRCh38:4:55236649-55437873 region, GRCh38:4:55439495-55586511 region
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCh38:4:55367316-55516239 region targeted by Alexa Fluor 568-labeled BAC
ch02
GRCh38:4:55236649-55437873 region targeted by Alexa Fluor 488-labeled BAC
ch03
GRCh38:4:55439495-55586511 region targeted by Cy5-labeled BAC

4 Processed Files

Experiment
File
File Type
File Size
From Multiple Experiments
4DNESUZM62NC
Multiple Experiments
File
4DNFID78GRES
locus distances, submitter format (txt)
26.34 kB
Experiment
4DNEX1ZXFCBE
Bio Rep 1, Tec Rep 1
DNA FISH on HFF-hTERT
File
4DNFI8PW6Q8K
loci distances (txt)
50.23 kB
Experiment
4DNEXLWGXDGF
Bio Rep 1, Tec Rep 2
DNA FISH on HFF-hTERT
File
4DNFI2KZQ91N
loci distances (txt)
54.26 kB
Experiment
4DNEX2TS4CZZ
Bio Rep 1, Tec Rep 3
DNA FISH on HFF-hTERT
File
4DNFIKMXSZKN
loci distances (txt)
48.36 kB