ExperimentSetReplicate

ExperimentSet4DNESZF3ZMBB
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FISH/IF of Chromosome 11-Active and Chromosome 2-Active and Nucleolus

   May 5th, 2018 at 4:05am
Source Publication
Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Quinodoz SA, Ollikainen N, et al., Cell 2018

Assay Description  

Experiment Set Properties  

Set Type 
Replicate
Organism 
M. musculus
Sample Type 
stem cells
Sample 
F1 2-1 mESC line
Experiment Type(s) 
DNA FISH
Modification Type 
None
Treatment Type 
None
Assay Details 
Target: Chromosomes, GRCm38:11:117138538-118138747 mouse region, GRCm38:2:29844332-30444626 mouse region, Ncl mouse protein
Sample Image 
DNA FISH sample image
View File Item - 4DNFIUO74Y5Y
Channel
Path
 
ch00
Chromosomes targeted by DAPI
ch01
GRCm38:11:117138538-118138747 mouse region targeted by 495/517nm fluorophore-labeled oligo probe set
ch02
GRCm38:2:29844332-30444626 mouse region targeted by 547/565nm fluorophore-labeled oligo probe set
ch03
Ncl mouse protein targeted by rabbit anti-nucleolin antibody (with Alexa Fluor 647-labeled anti-rabbit secondary antibody)

14 Raw Files

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Experiment
File
File Size
File Format
File Type
Biosample
4DNBS2F7M7RP
Bio Replicate 1
Experiment
4DNEXBG6G3JV
Tech Replicate 1
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4DNFIUO74Y5Y
1.31 GB
r3d
Z-stack
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4DNFIPPUNZQE
1.31 GB
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4DNFIOGFANN2
1.31 GB
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4DNFI2Q79CHZ
1.31 GB
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4DNFIMKBWF25
1.31 GB
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4DNFI7FZU73H
1.31 GB
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4DNFI3BPGYWT
1.31 GB
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4DNFIKR9965X
1.31 GB
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4DNFIIW591C1
1.31 GB
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4DNFIF5BT1TB
1.31 GB
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4DNFIMU1XDS3
1.31 GB
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4DNFI29FGGAQ
1.31 GB
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4DNFI52PSJAI
1.31 GB
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4DNFIN61MAC1
1.31 GB
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