Capture Hi-C4DNEXOGZDPCO
released
January 22nd, 2021 at 12:20am
Source Publication
Cohesin-mediated loop anchors confine the location of human replication origins
Emerson DJ, Zhao PA, et al., bioRxiv 2021
Note - linked raw fastq files contain short enriched reads
Care should be taken when using the FastQ files linked to this Experiment Set. The library was prepared from sequences enriched for a particular region of the genome using an 5C (Capture Hi-C) protocol. Alignment should be performed with an index generated from the oligonucleotides used for enrichment - available as a reference file linked the experiments in this set. Because the reads are short and contain adapter sequences alignment using a whole genome index will fail.
Properties
Experiment Type
Follows SOP
No
Biosample
Digestion Enzyme
Biosample Modifications
Crispr deletion for 30KB CTCF deletion
Biosample Treatments
None