{"lab": {"@id": "/labs/job-dekker-lab/", "status": "current", "correspondence": [{"contact_email": "am9iLmRla2tlckB1bWFzc21lZC5lZHU=", "@id": "/users/83b5073a-069b-4162-9b30-6f42d5551e34/", "display_title": "Job Dekker"}], "title": "Job Dekker, UMMS", "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "display_title": "Job Dekker, UMMS", "@type": ["Lab", "Item"], "pi": {"error": "no view permissions"}, "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"center": "External", "center_title": "External", "status": "current", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "@id": "/awards/external-award/", "description": "Funding source is from outside 4DN.", "display_title": "EXTERNAL AWARD", "@type": ["Award", "Item"], "project": "External", "name": "external-award", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "files": [{"uuid": "684a73f4-bc8c-429f-ae71-7e7390c485af", "dbxrefs": ["SRA:SRR5938646"], "@type": ["FileFastq", "File", "Item"], "upload_key": "684a73f4-bc8c-429f-ae71-7e7390c485af/4DNFI3VXYZCQ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI3VXYZCQ", "display_title": "4DNFI3VXYZCQ.fastq.gz", "@id": "/files-fastq/4DNFI3VXYZCQ/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI3VXYZCQ/@@download/4DNFI3VXYZCQ.fastq.gz", "file_size": 202790417, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3VXYZCQ/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "78556f33-979c-4c97-b7e2-26c880480b0c", "@id": "/quality-metrics-fastqc/78556f33-979c-4c97-b7e2-26c880480b0c/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIPL1UZ95/", "accession": "4DNFIPL1UZ95", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIPL1UZ95.fastq.gz", "paired_end": "2", "status": "released", "uuid": "1a543857-d1e5-46d6-a269-128865b2d62e", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938646", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938646"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "1a543857-d1e5-46d6-a269-128865b2d62e", "dbxrefs": ["SRA:SRR5938646"], "@type": ["FileFastq", "File", "Item"], "upload_key": "1a543857-d1e5-46d6-a269-128865b2d62e/4DNFIPL1UZ95.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIPL1UZ95", "display_title": "4DNFIPL1UZ95.fastq.gz", "@id": "/files-fastq/4DNFIPL1UZ95/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIPL1UZ95/@@download/4DNFIPL1UZ95.fastq.gz", "file_size": 203870636, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIPL1UZ95/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "505c23cf-6ea0-4442-b0a9-289cb654957d", "@id": "/quality-metrics-fastqc/505c23cf-6ea0-4442-b0a9-289cb654957d/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI3VXYZCQ/", "accession": "4DNFI3VXYZCQ", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI3VXYZCQ.fastq.gz", "paired_end": "1", "status": "released", "uuid": "684a73f4-bc8c-429f-ae71-7e7390c485af", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938646", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938646"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "2c3780a8-c7a2-444c-b054-ebafb0da4ec6", "dbxrefs": ["SRA:SRR5938643"], "@type": ["FileFastq", "File", "Item"], "upload_key": "2c3780a8-c7a2-444c-b054-ebafb0da4ec6/4DNFIUM6VK9B.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIUM6VK9B", "display_title": "4DNFIUM6VK9B.fastq.gz", "@id": "/files-fastq/4DNFIUM6VK9B/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIUM6VK9B/@@download/4DNFIUM6VK9B.fastq.gz", "file_size": 198450505, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUM6VK9B/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "865282e3-33c6-48e3-ad6b-d8c07531dbf2", "@id": "/quality-metrics-fastqc/865282e3-33c6-48e3-ad6b-d8c07531dbf2/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFILTP7VGU/", "accession": "4DNFILTP7VGU", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFILTP7VGU.fastq.gz", "paired_end": "2", "status": "released", "uuid": "22a8351e-8785-46e7-a811-9ab3fc1ce7cc", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938643", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938643"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "22a8351e-8785-46e7-a811-9ab3fc1ce7cc", "dbxrefs": ["SRA:SRR5938643"], "@type": ["FileFastq", "File", "Item"], "upload_key": "22a8351e-8785-46e7-a811-9ab3fc1ce7cc/4DNFILTP7VGU.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFILTP7VGU", "display_title": "4DNFILTP7VGU.fastq.gz", "@id": "/files-fastq/4DNFILTP7VGU/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFILTP7VGU/@@download/4DNFILTP7VGU.fastq.gz", "file_size": 202129631, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILTP7VGU/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "88a9bb11-8fbe-4f5d-98c3-7f11a71877b2", "@id": "/quality-metrics-fastqc/88a9bb11-8fbe-4f5d-98c3-7f11a71877b2/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIUM6VK9B/", "accession": "4DNFIUM6VK9B", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIUM6VK9B.fastq.gz", "paired_end": "1", "status": "released", "uuid": "2c3780a8-c7a2-444c-b054-ebafb0da4ec6", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938643", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938643"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "ef2c91a4-9298-4a5b-9e5f-5058f3acdeb0", "dbxrefs": ["SRA:SRR5938642"], "@type": ["FileFastq", "File", "Item"], "upload_key": "ef2c91a4-9298-4a5b-9e5f-5058f3acdeb0/4DNFIF362IM8.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIF362IM8", "display_title": "4DNFIF362IM8.fastq.gz", "@id": "/files-fastq/4DNFIF362IM8/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIF362IM8/@@download/4DNFIF362IM8.fastq.gz", "file_size": 195397372, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIF362IM8/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "48a09753-951a-4f90-a196-0b1ca2478c15", "@id": "/quality-metrics-fastqc/48a09753-951a-4f90-a196-0b1ca2478c15/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIVFGMX4T/", "accession": "4DNFIVFGMX4T", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIVFGMX4T.fastq.gz", "paired_end": "2", "status": "released", "uuid": "b19e7822-bf5f-4479-895d-83bdfb138a9a", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938642", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938642"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "b19e7822-bf5f-4479-895d-83bdfb138a9a", "dbxrefs": ["SRA:SRR5938642"], "@type": ["FileFastq", "File", "Item"], "upload_key": "b19e7822-bf5f-4479-895d-83bdfb138a9a/4DNFIVFGMX4T.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIVFGMX4T", "display_title": "4DNFIVFGMX4T.fastq.gz", "@id": "/files-fastq/4DNFIVFGMX4T/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIVFGMX4T/@@download/4DNFIVFGMX4T.fastq.gz", "file_size": 197475849, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVFGMX4T/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "731fb122-f8c8-423b-8770-fb25dedbf4df", "@id": "/quality-metrics-fastqc/731fb122-f8c8-423b-8770-fb25dedbf4df/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIF362IM8/", "accession": "4DNFIF362IM8", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIF362IM8.fastq.gz", "paired_end": "1", "status": "released", "uuid": "ef2c91a4-9298-4a5b-9e5f-5058f3acdeb0", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938642", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938642"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "c61e8761-2df9-4b75-90c3-ed07fe0dd0e9", "dbxrefs": ["SRA:SRR5938640"], "@type": ["FileFastq", "File", "Item"], "upload_key": "c61e8761-2df9-4b75-90c3-ed07fe0dd0e9/4DNFI9QMZJD7.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI9QMZJD7", "display_title": "4DNFI9QMZJD7.fastq.gz", "@id": "/files-fastq/4DNFI9QMZJD7/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI9QMZJD7/@@download/4DNFI9QMZJD7.fastq.gz", "file_size": 192139756, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI9QMZJD7/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "66d01f7a-4c04-4886-aa39-8141f546a5ed", "@id": "/quality-metrics-fastqc/66d01f7a-4c04-4886-aa39-8141f546a5ed/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIU8OWV5S/", "accession": "4DNFIU8OWV5S", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIU8OWV5S.fastq.gz", "paired_end": "2", "status": "released", "uuid": "35b9cfe4-bed0-4f61-a06d-747201e21113", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938640", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938640"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "35b9cfe4-bed0-4f61-a06d-747201e21113", "dbxrefs": ["SRA:SRR5938640"], "@type": ["FileFastq", "File", "Item"], "upload_key": "35b9cfe4-bed0-4f61-a06d-747201e21113/4DNFIU8OWV5S.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIU8OWV5S", "display_title": "4DNFIU8OWV5S.fastq.gz", "@id": "/files-fastq/4DNFIU8OWV5S/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIU8OWV5S/@@download/4DNFIU8OWV5S.fastq.gz", "file_size": 175140126, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU8OWV5S/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "eab6c4df-fe82-4bf2-9ed0-0c7022311e48", "@id": "/quality-metrics-fastqc/eab6c4df-fe82-4bf2-9ed0-0c7022311e48/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI9QMZJD7/", "accession": "4DNFI9QMZJD7", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI9QMZJD7.fastq.gz", "paired_end": "1", "status": "released", "uuid": "c61e8761-2df9-4b75-90c3-ed07fe0dd0e9", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938640", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938640"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "a57ebaa8-bb1d-4309-95fa-c6c364c50fd8", "dbxrefs": ["SRA:SRR5938639"], "@type": ["FileFastq", "File", "Item"], "upload_key": "a57ebaa8-bb1d-4309-95fa-c6c364c50fd8/4DNFIBWWDUNL.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIBWWDUNL", "display_title": "4DNFIBWWDUNL.fastq.gz", "@id": "/files-fastq/4DNFIBWWDUNL/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIBWWDUNL/@@download/4DNFIBWWDUNL.fastq.gz", "file_size": 190896617, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBWWDUNL/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "b6cabefd-3953-42df-a052-f9b1b7939d8f", "@id": "/quality-metrics-fastqc/b6cabefd-3953-42df-a052-f9b1b7939d8f/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIS9O2SDN/", "accession": "4DNFIS9O2SDN", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIS9O2SDN.fastq.gz", "paired_end": "2", "status": "released", "uuid": "fb279808-2652-4e9c-810b-13061c5deb8c", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938639", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938639"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "fb279808-2652-4e9c-810b-13061c5deb8c", "dbxrefs": ["SRA:SRR5938639"], "@type": ["FileFastq", "File", "Item"], "upload_key": "fb279808-2652-4e9c-810b-13061c5deb8c/4DNFIS9O2SDN.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIS9O2SDN", "display_title": "4DNFIS9O2SDN.fastq.gz", "@id": "/files-fastq/4DNFIS9O2SDN/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIS9O2SDN/@@download/4DNFIS9O2SDN.fastq.gz", "file_size": 193215001, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIS9O2SDN/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "6b0795dc-3784-42f2-a047-dfbead90336e", "@id": "/quality-metrics-fastqc/6b0795dc-3784-42f2-a047-dfbead90336e/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIBWWDUNL/", "accession": "4DNFIBWWDUNL", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIBWWDUNL.fastq.gz", "paired_end": "1", "status": "released", "uuid": "a57ebaa8-bb1d-4309-95fa-c6c364c50fd8", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938639", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938639"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "c33976aa-e17d-4f24-be2b-07a9ac08eb83", "dbxrefs": ["SRA:SRR5938638"], "@type": ["FileFastq", "File", "Item"], "upload_key": "c33976aa-e17d-4f24-be2b-07a9ac08eb83/4DNFIISR72KY.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIISR72KY", "display_title": "4DNFIISR72KY.fastq.gz", "@id": "/files-fastq/4DNFIISR72KY/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIISR72KY/@@download/4DNFIISR72KY.fastq.gz", "file_size": 202639827, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIISR72KY/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "86a84698-9921-4029-9afc-e5788c59b0be", "@id": "/quality-metrics-fastqc/86a84698-9921-4029-9afc-e5788c59b0be/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIU4T4L4J/", "accession": "4DNFIU4T4L4J", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIU4T4L4J.fastq.gz", "paired_end": "2", "status": "released", "uuid": "2514a77f-b4ad-4ca4-91ec-5335d9fba2e7", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938638", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938638"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "2514a77f-b4ad-4ca4-91ec-5335d9fba2e7", "dbxrefs": ["SRA:SRR5938638"], "@type": ["FileFastq", "File", "Item"], "upload_key": "2514a77f-b4ad-4ca4-91ec-5335d9fba2e7/4DNFIU4T4L4J.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIU4T4L4J", "display_title": "4DNFIU4T4L4J.fastq.gz", "@id": "/files-fastq/4DNFIU4T4L4J/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIU4T4L4J/@@download/4DNFIU4T4L4J.fastq.gz", "file_size": 206211170, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIU4T4L4J/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "e656a065-71ae-4990-99e3-741d170eb159", "@id": "/quality-metrics-fastqc/e656a065-71ae-4990-99e3-741d170eb159/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIISR72KY/", "accession": "4DNFIISR72KY", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIISR72KY.fastq.gz", "paired_end": "1", "status": "released", "uuid": "c33976aa-e17d-4f24-be2b-07a9ac08eb83", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938638", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938638"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "682bcb4e-908a-48e3-afee-8a09451b5069", "dbxrefs": ["SRA:SRR5938637"], "@type": ["FileFastq", "File", "Item"], "upload_key": "682bcb4e-908a-48e3-afee-8a09451b5069/4DNFIKVJNLTZ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIKVJNLTZ", "display_title": "4DNFIKVJNLTZ.fastq.gz", "@id": "/files-fastq/4DNFIKVJNLTZ/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIKVJNLTZ/@@download/4DNFIKVJNLTZ.fastq.gz", "file_size": 199334404, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIKVJNLTZ/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "5587c592-4483-429d-b014-a81518eef5de", "@id": "/quality-metrics-fastqc/5587c592-4483-429d-b014-a81518eef5de/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIRP3M2HG/", "accession": "4DNFIRP3M2HG", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIRP3M2HG.fastq.gz", "paired_end": "2", "status": "released", "uuid": "a32113d7-ff11-4a9d-ab78-979f4219c41a", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938637", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938637"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "a32113d7-ff11-4a9d-ab78-979f4219c41a", "dbxrefs": ["SRA:SRR5938637"], "@type": ["FileFastq", "File", "Item"], "upload_key": "a32113d7-ff11-4a9d-ab78-979f4219c41a/4DNFIRP3M2HG.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIRP3M2HG", "display_title": "4DNFIRP3M2HG.fastq.gz", "@id": "/files-fastq/4DNFIRP3M2HG/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIRP3M2HG/@@download/4DNFIRP3M2HG.fastq.gz", "file_size": 202099450, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRP3M2HG/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "b121dd00-639f-4809-bf1c-95bc1f41d2a3", "@id": "/quality-metrics-fastqc/b121dd00-639f-4809-bf1c-95bc1f41d2a3/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIKVJNLTZ/", "accession": "4DNFIKVJNLTZ", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIKVJNLTZ.fastq.gz", "paired_end": "1", "status": "released", "uuid": "682bcb4e-908a-48e3-afee-8a09451b5069", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938637", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938637"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "5ab83d1c-7d53-4ff7-be32-572411059a29", "dbxrefs": ["SRA:SRR5938636"], "@type": ["FileFastq", "File", "Item"], "upload_key": "5ab83d1c-7d53-4ff7-be32-572411059a29/4DNFII266IQ6.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFII266IQ6", "display_title": "4DNFII266IQ6.fastq.gz", "@id": "/files-fastq/4DNFII266IQ6/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFII266IQ6/@@download/4DNFII266IQ6.fastq.gz", "file_size": 196812492, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFII266IQ6/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "33ecdc9c-aa96-40f3-945a-f8e8d84607ec", "@id": "/quality-metrics-fastqc/33ecdc9c-aa96-40f3-945a-f8e8d84607ec/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFILAIOZ89/", "accession": "4DNFILAIOZ89", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFILAIOZ89.fastq.gz", "paired_end": "2", "status": "released", "uuid": "1e5b734c-5fe7-4825-b558-b34956769039", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938636", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938636"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "1e5b734c-5fe7-4825-b558-b34956769039", "dbxrefs": ["SRA:SRR5938636"], "@type": ["FileFastq", "File", "Item"], "upload_key": "1e5b734c-5fe7-4825-b558-b34956769039/4DNFILAIOZ89.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFILAIOZ89", "display_title": "4DNFILAIOZ89.fastq.gz", "@id": "/files-fastq/4DNFILAIOZ89/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFILAIOZ89/@@download/4DNFILAIOZ89.fastq.gz", "file_size": 197903043, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFILAIOZ89/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "cf01fedb-c32b-4208-8e3c-f44344d9a6f8", "@id": "/quality-metrics-fastqc/cf01fedb-c32b-4208-8e3c-f44344d9a6f8/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFII266IQ6/", "accession": "4DNFII266IQ6", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFII266IQ6.fastq.gz", "paired_end": "1", "status": "released", "uuid": "5ab83d1c-7d53-4ff7-be32-572411059a29", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938636", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938636"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "c7caed82-1ef4-48da-b7f7-cec0d1a928cb", "dbxrefs": ["SRA:SRR5938635"], "@type": ["FileFastq", "File", "Item"], "upload_key": "c7caed82-1ef4-48da-b7f7-cec0d1a928cb/4DNFIB417Z69.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIB417Z69", "display_title": "4DNFIB417Z69.fastq.gz", "@id": "/files-fastq/4DNFIB417Z69/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIB417Z69/@@download/4DNFIB417Z69.fastq.gz", "file_size": 201058583, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIB417Z69/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "b26da0cc-cad5-43b4-9bc1-a960795d64ce", "@id": "/quality-metrics-fastqc/b26da0cc-cad5-43b4-9bc1-a960795d64ce/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIAJ164KB/", "accession": "4DNFIAJ164KB", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIAJ164KB.fastq.gz", "paired_end": "2", "status": "released", "uuid": "05f1bf10-8856-447c-ab08-9d4eb6368582", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938635", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938635"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "05f1bf10-8856-447c-ab08-9d4eb6368582", "dbxrefs": ["SRA:SRR5938635"], "@type": ["FileFastq", "File", "Item"], "upload_key": "05f1bf10-8856-447c-ab08-9d4eb6368582/4DNFIAJ164KB.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIAJ164KB", "display_title": "4DNFIAJ164KB.fastq.gz", "@id": "/files-fastq/4DNFIAJ164KB/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIAJ164KB/@@download/4DNFIAJ164KB.fastq.gz", "file_size": 202319753, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAJ164KB/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "a5e60c92-7d7f-4c5a-bae5-95f06412b9ef", "@id": "/quality-metrics-fastqc/a5e60c92-7d7f-4c5a-bae5-95f06412b9ef/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIB417Z69/", "accession": "4DNFIB417Z69", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIB417Z69.fastq.gz", "paired_end": "1", "status": "released", "uuid": "c7caed82-1ef4-48da-b7f7-cec0d1a928cb", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938635", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938635"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "874e2af4-8cfc-4809-b45f-f95b08deb608", "dbxrefs": ["SRA:SRR5938634"], "@type": ["FileFastq", "File", "Item"], "upload_key": "874e2af4-8cfc-4809-b45f-f95b08deb608/4DNFI5XAA32Z.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI5XAA32Z", "display_title": "4DNFI5XAA32Z.fastq.gz", "@id": "/files-fastq/4DNFI5XAA32Z/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI5XAA32Z/@@download/4DNFI5XAA32Z.fastq.gz", "file_size": 195264776, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI5XAA32Z/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "cc7012da-472d-4f77-b016-a2324022bab6", "@id": "/quality-metrics-fastqc/cc7012da-472d-4f77-b016-a2324022bab6/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIJH3VO9M/", "accession": "4DNFIJH3VO9M", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIJH3VO9M.fastq.gz", "paired_end": "2", "status": "released", "uuid": "8c8f2305-1fb6-4862-8fe3-8ac3c999c075", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938634", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938634"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "8c8f2305-1fb6-4862-8fe3-8ac3c999c075", "dbxrefs": ["SRA:SRR5938634"], "@type": ["FileFastq", "File", "Item"], "upload_key": "8c8f2305-1fb6-4862-8fe3-8ac3c999c075/4DNFIJH3VO9M.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIJH3VO9M", "display_title": "4DNFIJH3VO9M.fastq.gz", "@id": "/files-fastq/4DNFIJH3VO9M/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIJH3VO9M/@@download/4DNFIJH3VO9M.fastq.gz", "file_size": 177976313, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJH3VO9M/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "dc9b3035-8ff9-4b7e-8e12-1427b6d7c08c", "@id": "/quality-metrics-fastqc/dc9b3035-8ff9-4b7e-8e12-1427b6d7c08c/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI5XAA32Z/", "accession": "4DNFI5XAA32Z", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI5XAA32Z.fastq.gz", "paired_end": "1", "status": "released", "uuid": "874e2af4-8cfc-4809-b45f-f95b08deb608", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938634", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938634"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "5b019aa3-e590-4f0d-a3c3-6cc96ab03c97", "dbxrefs": ["SRA:SRR5938633"], "@type": ["FileFastq", "File", "Item"], "upload_key": "5b019aa3-e590-4f0d-a3c3-6cc96ab03c97/4DNFIIX4KYUH.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIIX4KYUH", "display_title": "4DNFIIX4KYUH.fastq.gz", "@id": "/files-fastq/4DNFIIX4KYUH/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIIX4KYUH/@@download/4DNFIIX4KYUH.fastq.gz", "file_size": 194030369, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIX4KYUH/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "55f47511-6c72-4065-a2f6-77225b644445", "@id": "/quality-metrics-fastqc/55f47511-6c72-4065-a2f6-77225b644445/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIZ2ISMFU/", "accession": "4DNFIZ2ISMFU", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIZ2ISMFU.fastq.gz", "paired_end": "2", "status": "released", "uuid": "405021e8-9640-4314-94c4-1cb5670bc1e7", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938633", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938633"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "405021e8-9640-4314-94c4-1cb5670bc1e7", "dbxrefs": ["SRA:SRR5938633"], "@type": ["FileFastq", "File", "Item"], "upload_key": "405021e8-9640-4314-94c4-1cb5670bc1e7/4DNFIZ2ISMFU.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIZ2ISMFU", "display_title": "4DNFIZ2ISMFU.fastq.gz", "@id": "/files-fastq/4DNFIZ2ISMFU/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIZ2ISMFU/@@download/4DNFIZ2ISMFU.fastq.gz", "file_size": 195931808, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZ2ISMFU/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "a22f9dc3-feec-49f8-b161-26972aaf66af", "@id": "/quality-metrics-fastqc/a22f9dc3-feec-49f8-b161-26972aaf66af/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIIX4KYUH/", "accession": "4DNFIIX4KYUH", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIIX4KYUH.fastq.gz", "paired_end": "1", "status": "released", "uuid": "5b019aa3-e590-4f0d-a3c3-6cc96ab03c97", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938633", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938633"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "42ff4b4c-dd1c-43ae-99f0-5a7dbc20881f", "dbxrefs": ["SRA:SRR5938632"], "@type": ["FileFastq", "File", "Item"], "upload_key": "42ff4b4c-dd1c-43ae-99f0-5a7dbc20881f/4DNFI4LDWEKT.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI4LDWEKT", "display_title": "4DNFI4LDWEKT.fastq.gz", "@id": "/files-fastq/4DNFI4LDWEKT/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI4LDWEKT/@@download/4DNFI4LDWEKT.fastq.gz", "file_size": 199508460, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI4LDWEKT/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "3d66c6f7-69cd-43d6-a578-415123113675", "@id": "/quality-metrics-fastqc/3d66c6f7-69cd-43d6-a578-415123113675/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIZISFQ6H/", "accession": "4DNFIZISFQ6H", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIZISFQ6H.fastq.gz", "paired_end": "2", "status": "released", "uuid": "58bc33b0-0b93-4492-aa54-735ded455825", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938632", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938632"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "58bc33b0-0b93-4492-aa54-735ded455825", "dbxrefs": ["SRA:SRR5938632"], "@type": ["FileFastq", "File", "Item"], "upload_key": "58bc33b0-0b93-4492-aa54-735ded455825/4DNFIZISFQ6H.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIZISFQ6H", "display_title": "4DNFIZISFQ6H.fastq.gz", "@id": "/files-fastq/4DNFIZISFQ6H/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIZISFQ6H/@@download/4DNFIZISFQ6H.fastq.gz", "file_size": 201782159, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZISFQ6H/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "24139481-674c-482c-8a96-ba5d4ffc0bc0", "@id": "/quality-metrics-fastqc/24139481-674c-482c-8a96-ba5d4ffc0bc0/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI4LDWEKT/", "accession": "4DNFI4LDWEKT", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI4LDWEKT.fastq.gz", "paired_end": "1", "status": "released", "uuid": "42ff4b4c-dd1c-43ae-99f0-5a7dbc20881f", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938632", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938632"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "f032a9be-5d31-4799-9f89-bd34f9d4890b", "dbxrefs": ["SRA:SRR5938631"], "@type": ["FileFastq", "File", "Item"], "upload_key": "f032a9be-5d31-4799-9f89-bd34f9d4890b/4DNFIVQBB3DP.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIVQBB3DP", "display_title": "4DNFIVQBB3DP.fastq.gz", "@id": "/files-fastq/4DNFIVQBB3DP/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIVQBB3DP/@@download/4DNFIVQBB3DP.fastq.gz", "file_size": 206210368, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVQBB3DP/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "875d16f3-112c-4673-be78-0d3f8f76734a", "@id": "/quality-metrics-fastqc/875d16f3-112c-4673-be78-0d3f8f76734a/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIHQFD6J6/", "accession": "4DNFIHQFD6J6", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIHQFD6J6.fastq.gz", "paired_end": "2", "status": "released", "uuid": "85aa86eb-a666-48ff-9326-29b5bf16157e", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938631", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938631"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "85aa86eb-a666-48ff-9326-29b5bf16157e", "dbxrefs": ["SRA:SRR5938631"], "@type": ["FileFastq", "File", "Item"], "upload_key": "85aa86eb-a666-48ff-9326-29b5bf16157e/4DNFIHQFD6J6.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIHQFD6J6", "display_title": "4DNFIHQFD6J6.fastq.gz", "@id": "/files-fastq/4DNFIHQFD6J6/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIHQFD6J6/@@download/4DNFIHQFD6J6.fastq.gz", "file_size": 209437912, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIHQFD6J6/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "01d318c5-f4f1-4996-840e-b7584800c560", "@id": "/quality-metrics-fastqc/01d318c5-f4f1-4996-840e-b7584800c560/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIVQBB3DP/", "accession": "4DNFIVQBB3DP", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIVQBB3DP.fastq.gz", "paired_end": "1", "status": "released", "uuid": "f032a9be-5d31-4799-9f89-bd34f9d4890b", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938631", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938631"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "23c53aae-72c5-4834-90c0-091bc609d689", "dbxrefs": ["SRA:SRR5938630"], "@type": ["FileFastq", "File", "Item"], "upload_key": "23c53aae-72c5-4834-90c0-091bc609d689/4DNFIKBQAUCY.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIKBQAUCY", "display_title": "4DNFIKBQAUCY.fastq.gz", "@id": "/files-fastq/4DNFIKBQAUCY/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIKBQAUCY/@@download/4DNFIKBQAUCY.fastq.gz", "file_size": 203662323, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIKBQAUCY/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "99c858bc-56b3-4da3-91c0-e51a53b57863", "@id": "/quality-metrics-fastqc/99c858bc-56b3-4da3-91c0-e51a53b57863/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIZ4H9TOZ/", "accession": "4DNFIZ4H9TOZ", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIZ4H9TOZ.fastq.gz", "paired_end": "2", "status": "released", "uuid": "ec7a6278-61b6-4295-a861-08630f89a19e", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938630", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938630"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "ec7a6278-61b6-4295-a861-08630f89a19e", "dbxrefs": ["SRA:SRR5938630"], "@type": ["FileFastq", "File", "Item"], "upload_key": "ec7a6278-61b6-4295-a861-08630f89a19e/4DNFIZ4H9TOZ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIZ4H9TOZ", "display_title": "4DNFIZ4H9TOZ.fastq.gz", "@id": "/files-fastq/4DNFIZ4H9TOZ/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIZ4H9TOZ/@@download/4DNFIZ4H9TOZ.fastq.gz", "file_size": 205653134, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZ4H9TOZ/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "6c52f87c-47d0-4e18-9ab1-ad787e60f65d", "@id": "/quality-metrics-fastqc/6c52f87c-47d0-4e18-9ab1-ad787e60f65d/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIKBQAUCY/", "accession": "4DNFIKBQAUCY", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIKBQAUCY.fastq.gz", "paired_end": "1", "status": "released", "uuid": "23c53aae-72c5-4834-90c0-091bc609d689", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938630", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938630"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "e831ee0f-6690-4f7f-a931-1d3117ac2032", "dbxrefs": ["SRA:SRR5938629"], "@type": ["FileFastq", "File", "Item"], "upload_key": "e831ee0f-6690-4f7f-a931-1d3117ac2032/4DNFI92TWZEH.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI92TWZEH", "display_title": "4DNFI92TWZEH.fastq.gz", "@id": "/files-fastq/4DNFI92TWZEH/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI92TWZEH/@@download/4DNFI92TWZEH.fastq.gz", "file_size": 201311361, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI92TWZEH/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "9f64891b-473e-405c-968a-52cbefbde42c", "@id": "/quality-metrics-fastqc/9f64891b-473e-405c-968a-52cbefbde42c/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIRC8Q2GW/", "accession": "4DNFIRC8Q2GW", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIRC8Q2GW.fastq.gz", "paired_end": "2", "status": "released", "uuid": "340ed4c8-1b62-46fc-9eab-efd097837370", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938629", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938629"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "340ed4c8-1b62-46fc-9eab-efd097837370", "dbxrefs": ["SRA:SRR5938629"], "@type": ["FileFastq", "File", "Item"], "upload_key": "340ed4c8-1b62-46fc-9eab-efd097837370/4DNFIRC8Q2GW.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIRC8Q2GW", "display_title": "4DNFIRC8Q2GW.fastq.gz", "@id": "/files-fastq/4DNFIRC8Q2GW/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIRC8Q2GW/@@download/4DNFIRC8Q2GW.fastq.gz", "file_size": 182755510, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIRC8Q2GW/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "cfce612d-5490-4f16-9bb4-567d6e2a7a33", "@id": "/quality-metrics-fastqc/cfce612d-5490-4f16-9bb4-567d6e2a7a33/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI92TWZEH/", "accession": "4DNFI92TWZEH", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI92TWZEH.fastq.gz", "paired_end": "1", "status": "released", "uuid": "e831ee0f-6690-4f7f-a931-1d3117ac2032", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938629", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938629"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "125998da-05bd-41cd-9320-ab7694c75c81", "dbxrefs": ["SRA:SRR5938628"], "@type": ["FileFastq", "File", "Item"], "upload_key": "125998da-05bd-41cd-9320-ab7694c75c81/4DNFIB7L55KW.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIB7L55KW", "display_title": "4DNFIB7L55KW.fastq.gz", "@id": "/files-fastq/4DNFIB7L55KW/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIB7L55KW/@@download/4DNFIB7L55KW.fastq.gz", "file_size": 179674880, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIB7L55KW/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "25edc63a-d82e-45af-9d50-c47663e45ff4", "@id": "/quality-metrics-fastqc/25edc63a-d82e-45af-9d50-c47663e45ff4/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIC3WOFWS/", "accession": "4DNFIC3WOFWS", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIC3WOFWS.fastq.gz", "paired_end": "2", "status": "released", "uuid": "3b4ba103-fa65-4fc5-9871-4d47ec5f3a38", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938628", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938628"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "3b4ba103-fa65-4fc5-9871-4d47ec5f3a38", "dbxrefs": ["SRA:SRR5938628"], "@type": ["FileFastq", "File", "Item"], "upload_key": "3b4ba103-fa65-4fc5-9871-4d47ec5f3a38/4DNFIC3WOFWS.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIC3WOFWS", "display_title": "4DNFIC3WOFWS.fastq.gz", "@id": "/files-fastq/4DNFIC3WOFWS/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIC3WOFWS/@@download/4DNFIC3WOFWS.fastq.gz", "file_size": 201349196, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIC3WOFWS/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "f2a7271c-f00e-4a7c-8dfa-3df19d0887ff", "@id": "/quality-metrics-fastqc/f2a7271c-f00e-4a7c-8dfa-3df19d0887ff/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIB7L55KW/", "accession": "4DNFIB7L55KW", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIB7L55KW.fastq.gz", "paired_end": "1", "status": "released", "uuid": "125998da-05bd-41cd-9320-ab7694c75c81", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938628", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938628"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "5ee38da6-474d-427b-a289-166892451226", "dbxrefs": ["SRA:SRR5938627"], "@type": ["FileFastq", "File", "Item"], "upload_key": "5ee38da6-474d-427b-a289-166892451226/4DNFICY68ZDD.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFICY68ZDD", "display_title": "4DNFICY68ZDD.fastq.gz", "@id": "/files-fastq/4DNFICY68ZDD/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFICY68ZDD/@@download/4DNFICY68ZDD.fastq.gz", "file_size": 198259319, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFICY68ZDD/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "8302ec32-b71d-49b3-8352-8c44c8edc390", "@id": "/quality-metrics-fastqc/8302ec32-b71d-49b3-8352-8c44c8edc390/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIEY41EYW/", "accession": "4DNFIEY41EYW", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIEY41EYW.fastq.gz", "paired_end": "2", "status": "released", "uuid": "5763a716-daca-4573-b59b-af267a65b1da", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938627", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938627"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "5763a716-daca-4573-b59b-af267a65b1da", "dbxrefs": ["SRA:SRR5938627"], "@type": ["FileFastq", "File", "Item"], "upload_key": "5763a716-daca-4573-b59b-af267a65b1da/4DNFIEY41EYW.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIEY41EYW", "display_title": "4DNFIEY41EYW.fastq.gz", "@id": "/files-fastq/4DNFIEY41EYW/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIEY41EYW/@@download/4DNFIEY41EYW.fastq.gz", "file_size": 199057266, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEY41EYW/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "1a2b4f31-d394-45e7-ac07-9524e2d72dcd", "@id": "/quality-metrics-fastqc/1a2b4f31-d394-45e7-ac07-9524e2d72dcd/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFICY68ZDD/", "accession": "4DNFICY68ZDD", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFICY68ZDD.fastq.gz", "paired_end": "1", "status": "released", "uuid": "5ee38da6-474d-427b-a289-166892451226", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938627", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938627"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "0216bf76-53ef-44e6-85b6-d3c8e6959441", "dbxrefs": ["SRA:SRR5938626"], "@type": ["FileFastq", "File", "Item"], "upload_key": "0216bf76-53ef-44e6-85b6-d3c8e6959441/4DNFI29YKYGT.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI29YKYGT", "display_title": "4DNFI29YKYGT.fastq.gz", "@id": "/files-fastq/4DNFI29YKYGT/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI29YKYGT/@@download/4DNFI29YKYGT.fastq.gz", "file_size": 204171673, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI29YKYGT/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "3a1a5fcd-8513-4b4a-9539-1fe44a2cc188", "@id": "/quality-metrics-fastqc/3a1a5fcd-8513-4b4a-9539-1fe44a2cc188/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIXCRRP2E/", "accession": "4DNFIXCRRP2E", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIXCRRP2E.fastq.gz", "paired_end": "2", "status": "released", "uuid": "7978a17d-4450-4f82-8136-80f3bfb6b0b1", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938626", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938626"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "7978a17d-4450-4f82-8136-80f3bfb6b0b1", "dbxrefs": ["SRA:SRR5938626"], "@type": ["FileFastq", "File", "Item"], "upload_key": "7978a17d-4450-4f82-8136-80f3bfb6b0b1/4DNFIXCRRP2E.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIXCRRP2E", "display_title": "4DNFIXCRRP2E.fastq.gz", "@id": "/files-fastq/4DNFIXCRRP2E/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIXCRRP2E/@@download/4DNFIXCRRP2E.fastq.gz", "file_size": 186495154, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIXCRRP2E/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "f0e68990-1d48-488b-903f-d2b812ad7cb3", "@id": "/quality-metrics-fastqc/f0e68990-1d48-488b-903f-d2b812ad7cb3/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI29YKYGT/", "accession": "4DNFI29YKYGT", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI29YKYGT.fastq.gz", "paired_end": "1", "status": "released", "uuid": "0216bf76-53ef-44e6-85b6-d3c8e6959441", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938626", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938626"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "ddfb912a-eff1-4e38-b388-52338822aae4", "dbxrefs": ["SRA:SRR5938625"], "@type": ["FileFastq", "File", "Item"], "upload_key": "ddfb912a-eff1-4e38-b388-52338822aae4/4DNFIV4F4YO4.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIV4F4YO4", "display_title": "4DNFIV4F4YO4.fastq.gz", "@id": "/files-fastq/4DNFIV4F4YO4/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIV4F4YO4/@@download/4DNFIV4F4YO4.fastq.gz", "file_size": 203739731, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIV4F4YO4/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "9ee97bad-5dc8-4652-81f2-602bb72080e3", "@id": "/quality-metrics-fastqc/9ee97bad-5dc8-4652-81f2-602bb72080e3/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIECBWUVD/", "accession": "4DNFIECBWUVD", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIECBWUVD.fastq.gz", "paired_end": "2", "status": "released", "uuid": "ea51ad00-67f3-4658-9773-e1b3d27e65ef", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938625", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938625"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "ea51ad00-67f3-4658-9773-e1b3d27e65ef", "dbxrefs": ["SRA:SRR5938625"], "@type": ["FileFastq", "File", "Item"], "upload_key": "ea51ad00-67f3-4658-9773-e1b3d27e65ef/4DNFIECBWUVD.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIECBWUVD", "display_title": "4DNFIECBWUVD.fastq.gz", "@id": "/files-fastq/4DNFIECBWUVD/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIECBWUVD/@@download/4DNFIECBWUVD.fastq.gz", "file_size": 206819840, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIECBWUVD/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "0fa4f194-2d02-41e9-bf66-6b58980d0dd6", "@id": "/quality-metrics-fastqc/0fa4f194-2d02-41e9-bf66-6b58980d0dd6/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIV4F4YO4/", "accession": "4DNFIV4F4YO4", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIV4F4YO4.fastq.gz", "paired_end": "1", "status": "released", "uuid": "ddfb912a-eff1-4e38-b388-52338822aae4", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938625", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938625"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "0baf5879-35ce-4ff2-8e79-bb5a34c080fb", "dbxrefs": ["SRA:SRR5938624"], "@type": ["FileFastq", "File", "Item"], "upload_key": "0baf5879-35ce-4ff2-8e79-bb5a34c080fb/4DNFIBKNZQQB.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIBKNZQQB", "display_title": "4DNFIBKNZQQB.fastq.gz", "@id": "/files-fastq/4DNFIBKNZQQB/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIBKNZQQB/@@download/4DNFIBKNZQQB.fastq.gz", "file_size": 180525796, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBKNZQQB/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "62c2d937-f35a-4f2c-802c-1b5ee0169a68", "@id": "/quality-metrics-fastqc/62c2d937-f35a-4f2c-802c-1b5ee0169a68/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFII1ON4HZ/", "accession": "4DNFII1ON4HZ", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFII1ON4HZ.fastq.gz", "paired_end": "2", "status": "released", "uuid": "ea8f7a4d-a70f-4332-b324-36bf8e3ebd7d", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938624", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938624"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "ea8f7a4d-a70f-4332-b324-36bf8e3ebd7d", "dbxrefs": ["SRA:SRR5938624"], "@type": ["FileFastq", "File", "Item"], "upload_key": "ea8f7a4d-a70f-4332-b324-36bf8e3ebd7d/4DNFII1ON4HZ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFII1ON4HZ", "display_title": "4DNFII1ON4HZ.fastq.gz", "@id": "/files-fastq/4DNFII1ON4HZ/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFII1ON4HZ/@@download/4DNFII1ON4HZ.fastq.gz", "file_size": 181589233, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFII1ON4HZ/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "d87f905b-90cf-4dcf-9742-953b298122c1", "@id": "/quality-metrics-fastqc/d87f905b-90cf-4dcf-9742-953b298122c1/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIBKNZQQB/", "accession": "4DNFIBKNZQQB", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIBKNZQQB.fastq.gz", "paired_end": "1", "status": "released", "uuid": "0baf5879-35ce-4ff2-8e79-bb5a34c080fb", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938624", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938624"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "d3b52d0d-c83c-4eb0-9728-840eba8230a7", "dbxrefs": ["SRA:SRR5938648"], "@type": ["FileFastq", "File", "Item"], "upload_key": "d3b52d0d-c83c-4eb0-9728-840eba8230a7/4DNFI859XCF1.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI859XCF1", "display_title": "4DNFI859XCF1.fastq.gz", "@id": "/files-fastq/4DNFI859XCF1/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI859XCF1/@@download/4DNFI859XCF1.fastq.gz", "file_size": 196744893, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI859XCF1/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-19", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "e31c6a09-1552-4282-836e-2ad6c981bcac", "@id": "/quality-metrics-fastqc/e31c6a09-1552-4282-836e-2ad6c981bcac/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIGWSFINC/", "accession": "4DNFIGWSFINC", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIGWSFINC.fastq.gz", "paired_end": "2", "status": "released", "uuid": "def87d62-bb16-4b3e-9b48-842ddbb2d08b", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938648", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938648"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "def87d62-bb16-4b3e-9b48-842ddbb2d08b", "dbxrefs": ["SRA:SRR5938648"], "@type": ["FileFastq", "File", "Item"], "upload_key": "def87d62-bb16-4b3e-9b48-842ddbb2d08b/4DNFIGWSFINC.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIGWSFINC", "display_title": "4DNFIGWSFINC.fastq.gz", "@id": "/files-fastq/4DNFIGWSFINC/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIGWSFINC/@@download/4DNFIGWSFINC.fastq.gz", "file_size": 178706745, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIGWSFINC/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "0802293c-032d-473f-aaea-51a078278321", "@id": "/quality-metrics-fastqc/0802293c-032d-473f-aaea-51a078278321/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI859XCF1/", "accession": "4DNFI859XCF1", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI859XCF1.fastq.gz", "paired_end": "1", "status": "released", "uuid": "d3b52d0d-c83c-4eb0-9728-840eba8230a7", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938648", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938648"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "40f06976-d0c8-4772-b6a8-cbafc0e1aa01", "dbxrefs": ["SRA:SRR5938647"], "@type": ["FileFastq", "File", "Item"], "upload_key": "40f06976-d0c8-4772-b6a8-cbafc0e1aa01/4DNFIUTRDU1L.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIUTRDU1L", "display_title": "4DNFIUTRDU1L.fastq.gz", "@id": "/files-fastq/4DNFIUTRDU1L/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIUTRDU1L/@@download/4DNFIUTRDU1L.fastq.gz", "file_size": 175826123, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIUTRDU1L/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "ecce3af2-cb77-4d1a-8f3f-a7f2fcb0946a", "@id": "/quality-metrics-fastqc/ecce3af2-cb77-4d1a-8f3f-a7f2fcb0946a/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI8PYWDWR/", "accession": "4DNFI8PYWDWR", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI8PYWDWR.fastq.gz", "paired_end": "2", "status": "released", "uuid": "fdaea82d-e95a-4080-a1d2-e7bf8467d3cc", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938647", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938647"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "fdaea82d-e95a-4080-a1d2-e7bf8467d3cc", "dbxrefs": ["SRA:SRR5938647"], "@type": ["FileFastq", "File", "Item"], "upload_key": "fdaea82d-e95a-4080-a1d2-e7bf8467d3cc/4DNFI8PYWDWR.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI8PYWDWR", "display_title": "4DNFI8PYWDWR.fastq.gz", "@id": "/files-fastq/4DNFI8PYWDWR/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFI8PYWDWR/@@download/4DNFI8PYWDWR.fastq.gz", "file_size": 197671563, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI8PYWDWR/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "5ef2ab1b-48eb-4187-bc36-6f547d679462", "@id": "/quality-metrics-fastqc/5ef2ab1b-48eb-4187-bc36-6f547d679462/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIUTRDU1L/", "accession": "4DNFIUTRDU1L", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIUTRDU1L.fastq.gz", "paired_end": "1", "status": "released", "uuid": "40f06976-d0c8-4772-b6a8-cbafc0e1aa01", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938647", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938647"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "c4ad014e-0e49-495b-8743-a71b325a9c43", "dbxrefs": ["SRA:SRR5938649"], "@type": ["FileFastq", "File", "Item"], "upload_key": "c4ad014e-0e49-495b-8743-a71b325a9c43/4DNFIWDXXA8B.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIWDXXA8B", "display_title": "4DNFIWDXXA8B.fastq.gz", "@id": "/files-fastq/4DNFIWDXXA8B/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIWDXXA8B/@@download/4DNFIWDXXA8B.fastq.gz", "file_size": 179999024, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIWDXXA8B/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "a8080828-5c34-4d65-b859-ee6eb83a6e54", "@id": "/quality-metrics-fastqc/a8080828-5c34-4d65-b859-ee6eb83a6e54/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIBY27XDV/", "accession": "4DNFIBY27XDV", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIBY27XDV.fastq.gz", "paired_end": "2", "status": "released", "uuid": "4f6bbb43-94a0-432b-ab7b-752c53148bf2", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938649", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938649"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "4f6bbb43-94a0-432b-ab7b-752c53148bf2", "dbxrefs": ["SRA:SRR5938649"], "@type": ["FileFastq", "File", "Item"], "upload_key": "4f6bbb43-94a0-432b-ab7b-752c53148bf2/4DNFIBY27XDV.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIBY27XDV", "display_title": "4DNFIBY27XDV.fastq.gz", "@id": "/files-fastq/4DNFIBY27XDV/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIBY27XDV/@@download/4DNFIBY27XDV.fastq.gz", "file_size": 182600094, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBY27XDV/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "26abc701-af01-465e-9510-eed1d0ba7988", "@id": "/quality-metrics-fastqc/26abc701-af01-465e-9510-eed1d0ba7988/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIWDXXA8B/", "accession": "4DNFIWDXXA8B", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIWDXXA8B.fastq.gz", "paired_end": "1", "status": "released", "uuid": "c4ad014e-0e49-495b-8743-a71b325a9c43", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938649", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938649"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "2f5f0fd6-1176-4634-97b7-169b7b9735e8", "dbxrefs": ["SRA:SRR5938645"], "@type": ["FileFastq", "File", "Item"], "upload_key": "2f5f0fd6-1176-4634-97b7-169b7b9735e8/4DNFIZGMLOIA.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIZGMLOIA", "display_title": "4DNFIZGMLOIA.fastq.gz", "@id": "/files-fastq/4DNFIZGMLOIA/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIZGMLOIA/@@download/4DNFIZGMLOIA.fastq.gz", "file_size": 193683841, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIZGMLOIA/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "2981068e-1787-4472-9f78-c364a73dd8ec", "@id": "/quality-metrics-fastqc/2981068e-1787-4472-9f78-c364a73dd8ec/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIBAI1L3W/", "accession": "4DNFIBAI1L3W", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIBAI1L3W.fastq.gz", "paired_end": "2", "status": "released", "uuid": "04f78606-f854-4f3e-a111-9c61c98ce6ab", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938645", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938645"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "04f78606-f854-4f3e-a111-9c61c98ce6ab", "dbxrefs": ["SRA:SRR5938645"], "@type": ["FileFastq", "File", "Item"], "upload_key": "04f78606-f854-4f3e-a111-9c61c98ce6ab/4DNFIBAI1L3W.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIBAI1L3W", "display_title": "4DNFIBAI1L3W.fastq.gz", "@id": "/files-fastq/4DNFIBAI1L3W/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIBAI1L3W/@@download/4DNFIBAI1L3W.fastq.gz", "file_size": 175845412, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIBAI1L3W/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "00f2c258-74f4-467c-9309-be43fdc634e1", "@id": "/quality-metrics-fastqc/00f2c258-74f4-467c-9309-be43fdc634e1/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIZGMLOIA/", "accession": "4DNFIZGMLOIA", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIZGMLOIA.fastq.gz", "paired_end": "1", "status": "released", "uuid": "2f5f0fd6-1176-4634-97b7-169b7b9735e8", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938645", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938645"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "45cfe573-62b7-4b8c-8f36-3ea696bb1e6b", "dbxrefs": ["SRA:SRR5938644"], "@type": ["FileFastq", "File", "Item"], "upload_key": "45cfe573-62b7-4b8c-8f36-3ea696bb1e6b/4DNFINH2M878.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFINH2M878", "display_title": "4DNFINH2M878.fastq.gz", "@id": "/files-fastq/4DNFINH2M878/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFINH2M878/@@download/4DNFINH2M878.fastq.gz", "file_size": 197228136, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFINH2M878/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "b6256cc8-3235-4f89-aa4e-dee2ea8a5eb5", "@id": "/quality-metrics-fastqc/b6256cc8-3235-4f89-aa4e-dee2ea8a5eb5/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFITIS1LTQ/", "accession": "4DNFITIS1LTQ", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFITIS1LTQ.fastq.gz", "paired_end": "2", "status": "released", "uuid": "7a0ab1af-284b-4e03-9790-7e4cfa74b65b", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938644", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938644"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "7a0ab1af-284b-4e03-9790-7e4cfa74b65b", "dbxrefs": ["SRA:SRR5938644"], "@type": ["FileFastq", "File", "Item"], "upload_key": "7a0ab1af-284b-4e03-9790-7e4cfa74b65b/4DNFITIS1LTQ.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFITIS1LTQ", "display_title": "4DNFITIS1LTQ.fastq.gz", "@id": "/files-fastq/4DNFITIS1LTQ/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFITIS1LTQ/@@download/4DNFITIS1LTQ.fastq.gz", "file_size": 199350312, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFITIS1LTQ/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "85b3f880-ddca-4885-a511-c77472e3d959", "@id": "/quality-metrics-fastqc/85b3f880-ddca-4885-a511-c77472e3d959/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFINH2M878/", "accession": "4DNFINH2M878", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFINH2M878.fastq.gz", "paired_end": "1", "status": "released", "uuid": "45cfe573-62b7-4b8c-8f36-3ea696bb1e6b", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938644", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938644"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "8cfe47e3-0cd9-46a7-abf1-d38b777b142a", "dbxrefs": ["SRA:SRR5938650"], "@type": ["FileFastq", "File", "Item"], "upload_key": "8cfe47e3-0cd9-46a7-abf1-d38b777b142a/4DNFIJ9N2EYV.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIJ9N2EYV", "display_title": "4DNFIJ9N2EYV.fastq.gz", "@id": "/files-fastq/4DNFIJ9N2EYV/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIJ9N2EYV/@@download/4DNFIJ9N2EYV.fastq.gz", "file_size": 182894615, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJ9N2EYV/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "70c6dda1-e89c-4fd3-929c-d02fa82c12c9", "@id": "/quality-metrics-fastqc/70c6dda1-e89c-4fd3-929c-d02fa82c12c9/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI641WXUD/", "accession": "4DNFI641WXUD", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI641WXUD.fastq.gz", "paired_end": "2", "status": "released", "uuid": "33a85465-6225-4b64-9279-66d728453aa0", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938650", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938650"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "33a85465-6225-4b64-9279-66d728453aa0", "dbxrefs": ["SRA:SRR5938650"], "@type": ["FileFastq", "File", "Item"], "upload_key": "33a85465-6225-4b64-9279-66d728453aa0/4DNFI641WXUD.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI641WXUD", "display_title": "4DNFI641WXUD.fastq.gz", "@id": "/files-fastq/4DNFI641WXUD/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFI641WXUD/@@download/4DNFI641WXUD.fastq.gz", "file_size": 186127862, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI641WXUD/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "bfad4219-a8ce-4004-ad1d-535b4776b732", "@id": "/quality-metrics-fastqc/bfad4219-a8ce-4004-ad1d-535b4776b732/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIJ9N2EYV/", "accession": "4DNFIJ9N2EYV", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIJ9N2EYV.fastq.gz", "paired_end": "1", "status": "released", "uuid": "8cfe47e3-0cd9-46a7-abf1-d38b777b142a", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938650", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938650"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "a7cc9b22-dff9-43e4-9ad4-53336e4ae9f3", "dbxrefs": ["SRA:SRR5938651"], "@type": ["FileFastq", "File", "Item"], "upload_key": "a7cc9b22-dff9-43e4-9ad4-53336e4ae9f3/4DNFIV8P8SHX.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIV8P8SHX", "display_title": "4DNFIV8P8SHX.fastq.gz", "@id": "/files-fastq/4DNFIV8P8SHX/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIV8P8SHX/@@download/4DNFIV8P8SHX.fastq.gz", "file_size": 42148858, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIV8P8SHX/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 819739, "uuid": "fa6292ba-f9e0-4fd0-b859-ab2f3baf3e2d", "@id": "/quality-metrics-fastqc/fa6292ba-f9e0-4fd0-b859-ab2f3baf3e2d/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIPTMWGNW/", "accession": "4DNFIPTMWGNW", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIPTMWGNW.fastq.gz", "paired_end": "2", "status": "released", "uuid": "4905f68b-ab18-45ad-ad32-9010470e8388", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938651", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938651"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "4905f68b-ab18-45ad-ad32-9010470e8388", "dbxrefs": ["SRA:SRR5938651"], "@type": ["FileFastq", "File", "Item"], "upload_key": "4905f68b-ab18-45ad-ad32-9010470e8388/4DNFIPTMWGNW.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIPTMWGNW", "display_title": "4DNFIPTMWGNW.fastq.gz", "@id": "/files-fastq/4DNFIPTMWGNW/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIPTMWGNW/@@download/4DNFIPTMWGNW.fastq.gz", "file_size": 42692510, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIPTMWGNW/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 819739, "uuid": "4c017a91-99f8-4d40-b4c8-f795ba6e883b", "@id": "/quality-metrics-fastqc/4c017a91-99f8-4d40-b4c8-f795ba6e883b/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIV8P8SHX/", "accession": "4DNFIV8P8SHX", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIV8P8SHX.fastq.gz", "paired_end": "1", "status": "released", "uuid": "a7cc9b22-dff9-43e4-9ad4-53336e4ae9f3", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938651", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938651"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "dce914f0-529e-4681-aedc-0a728fb5a10c", "dbxrefs": ["SRA:SRR5938641"], "@type": ["FileFastq", "File", "Item"], "upload_key": "dce914f0-529e-4681-aedc-0a728fb5a10c/4DNFIJKPG8UH.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIJKPG8UH", "display_title": "4DNFIJKPG8UH.fastq.gz", "@id": "/files-fastq/4DNFIJKPG8UH/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIJKPG8UH/@@download/4DNFIJKPG8UH.fastq.gz", "file_size": 174194410, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJKPG8UH/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "2a739b3b-5747-4b00-89c6-b9bca5d9556f", "@id": "/quality-metrics-fastqc/2a739b3b-5747-4b00-89c6-b9bca5d9556f/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI11P7JI1/", "accession": "4DNFI11P7JI1", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI11P7JI1.fastq.gz", "paired_end": "2", "status": "released", "uuid": "9a21eb5d-3df5-4e50-bb65-9b483f9b0164", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938641", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938641"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "9a21eb5d-3df5-4e50-bb65-9b483f9b0164", "dbxrefs": ["SRA:SRR5938641"], "@type": ["FileFastq", "File", "Item"], "upload_key": "9a21eb5d-3df5-4e50-bb65-9b483f9b0164/4DNFI11P7JI1.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI11P7JI1", "display_title": "4DNFI11P7JI1.fastq.gz", "@id": "/files-fastq/4DNFI11P7JI1/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFI11P7JI1/@@download/4DNFI11P7JI1.fastq.gz", "file_size": 176560475, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI11P7JI1/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "fa0372bb-216e-4760-86e6-bc100993fb0b", "@id": "/quality-metrics-fastqc/fa0372bb-216e-4760-86e6-bc100993fb0b/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIJKPG8UH/", "accession": "4DNFIJKPG8UH", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIJKPG8UH.fastq.gz", "paired_end": "1", "status": "released", "uuid": "dce914f0-529e-4681-aedc-0a728fb5a10c", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938641", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938641"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "99f95f55-aef1-4f89-867c-4d81b354928b", "dbxrefs": ["SRA:SRR5938652"], "@type": ["FileFastq", "File", "Item"], "upload_key": "99f95f55-aef1-4f89-867c-4d81b354928b/4DNFIVRMXZD8.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIVRMXZD8", "display_title": "4DNFIVRMXZD8.fastq.gz", "@id": "/files-fastq/4DNFIVRMXZD8/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIVRMXZD8/@@download/4DNFIVRMXZD8.fastq.gz", "file_size": 183631568, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIVRMXZD8/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "7e791d39-5505-4613-a071-c3113547ef7e", "@id": "/quality-metrics-fastqc/7e791d39-5505-4613-a071-c3113547ef7e/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIJFYQHDI/", "accession": "4DNFIJFYQHDI", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIJFYQHDI.fastq.gz", "paired_end": "2", "status": "released", "uuid": "6a200006-2898-4152-8974-d78a061a3caa", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938652", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938652"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "6a200006-2898-4152-8974-d78a061a3caa", "dbxrefs": ["SRA:SRR5938652"], "@type": ["FileFastq", "File", "Item"], "upload_key": "6a200006-2898-4152-8974-d78a061a3caa/4DNFIJFYQHDI.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIJFYQHDI", "display_title": "4DNFIJFYQHDI.fastq.gz", "@id": "/files-fastq/4DNFIJFYQHDI/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIJFYQHDI/@@download/4DNFIJFYQHDI.fastq.gz", "file_size": 184573587, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIJFYQHDI/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "1ef9835a-a59f-44fd-b91c-dde4dd4248e1", "@id": "/quality-metrics-fastqc/1ef9835a-a59f-44fd-b91c-dde4dd4248e1/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIVRMXZD8/", "accession": "4DNFIVRMXZD8", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIVRMXZD8.fastq.gz", "paired_end": "1", "status": "released", "uuid": "99f95f55-aef1-4f89-867c-4d81b354928b", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938652", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938652"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "64e00082-d9ab-42f4-bf59-3454e7e6a141", "dbxrefs": ["SRA:SRR5938653"], "@type": ["FileFastq", "File", "Item"], "upload_key": "64e00082-d9ab-42f4-bf59-3454e7e6a141/4DNFI3SSLY2I.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI3SSLY2I", "display_title": "4DNFI3SSLY2I.fastq.gz", "@id": "/files-fastq/4DNFI3SSLY2I/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFI3SSLY2I/@@download/4DNFI3SSLY2I.fastq.gz", "file_size": 185486941, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI3SSLY2I/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "7ad7d1ca-9fe8-4670-94d8-18d23f1a932c", "@id": "/quality-metrics-fastqc/7ad7d1ca-9fe8-4670-94d8-18d23f1a932c/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIAV7QA61/", "accession": "4DNFIAV7QA61", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIAV7QA61.fastq.gz", "paired_end": "2", "status": "released", "uuid": "1dacc56f-fb82-42b0-835a-a796782fe4f6", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938653", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938653"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "1dacc56f-fb82-42b0-835a-a796782fe4f6", "dbxrefs": ["SRA:SRR5938653"], "@type": ["FileFastq", "File", "Item"], "upload_key": "1dacc56f-fb82-42b0-835a-a796782fe4f6/4DNFIAV7QA61.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIAV7QA61", "display_title": "4DNFIAV7QA61.fastq.gz", "@id": "/files-fastq/4DNFIAV7QA61/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIAV7QA61/@@download/4DNFIAV7QA61.fastq.gz", "file_size": 188529608, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIAV7QA61/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "bf416926-c1c2-47cb-a24e-d037e41bd4b5", "@id": "/quality-metrics-fastqc/bf416926-c1c2-47cb-a24e-d037e41bd4b5/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI3SSLY2I/", "accession": "4DNFI3SSLY2I", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI3SSLY2I.fastq.gz", "paired_end": "1", "status": "released", "uuid": "64e00082-d9ab-42f4-bf59-3454e7e6a141", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938653", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938653"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "102ddef3-22f8-40c8-93ff-bc5a56a8e0a4", "dbxrefs": ["SRA:SRR5938654"], "@type": ["FileFastq", "File", "Item"], "upload_key": "102ddef3-22f8-40c8-93ff-bc5a56a8e0a4/4DNFIY97R9B3.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIY97R9B3", "display_title": "4DNFIY97R9B3.fastq.gz", "@id": "/files-fastq/4DNFIY97R9B3/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIY97R9B3/@@download/4DNFIY97R9B3.fastq.gz", "file_size": 182023550, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIY97R9B3/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-19", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "c00d6a3c-421f-4a97-81be-05ee9f6c587d", "@id": "/quality-metrics-fastqc/c00d6a3c-421f-4a97-81be-05ee9f6c587d/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIXT2WLNK/", "accession": "4DNFIXT2WLNK", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIXT2WLNK.fastq.gz", "paired_end": "2", "status": "released", "uuid": "eea6e077-7452-40e0-a8e5-42fdd2d70386", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938654", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938654"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "eea6e077-7452-40e0-a8e5-42fdd2d70386", "dbxrefs": ["SRA:SRR5938654"], "@type": ["FileFastq", "File", "Item"], "upload_key": "eea6e077-7452-40e0-a8e5-42fdd2d70386/4DNFIXT2WLNK.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIXT2WLNK", "display_title": "4DNFIXT2WLNK.fastq.gz", "@id": "/files-fastq/4DNFIXT2WLNK/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIXT2WLNK/@@download/4DNFIXT2WLNK.fastq.gz", "file_size": 203366628, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIXT2WLNK/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "1a239738-256f-4597-bb3d-bd70706f8129", "@id": "/quality-metrics-fastqc/1a239738-256f-4597-bb3d-bd70706f8129/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIY97R9B3/", "accession": "4DNFIY97R9B3", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIY97R9B3.fastq.gz", "paired_end": "1", "status": "released", "uuid": "102ddef3-22f8-40c8-93ff-bc5a56a8e0a4", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938654", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938654"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "aa266a67-2be3-4bb2-a055-fe570bb78cee", "dbxrefs": ["SRA:SRR5938655"], "@type": ["FileFastq", "File", "Item"], "upload_key": "aa266a67-2be3-4bb2-a055-fe570bb78cee/4DNFIIDSK33S.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIIDSK33S", "display_title": "4DNFIIDSK33S.fastq.gz", "@id": "/files-fastq/4DNFIIDSK33S/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIIDSK33S/@@download/4DNFIIDSK33S.fastq.gz", "file_size": 198224712, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIIDSK33S/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "5139c75d-ee24-4336-bd5f-2fc71ce656af", "@id": "/quality-metrics-fastqc/5139c75d-ee24-4336-bd5f-2fc71ce656af/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIWEYQRJK/", "accession": "4DNFIWEYQRJK", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIWEYQRJK.fastq.gz", "paired_end": "2", "status": "released", "uuid": "984e1157-0f4e-4da4-a341-04756dfea92c", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938655", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938655"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "984e1157-0f4e-4da4-a341-04756dfea92c", "dbxrefs": ["SRA:SRR5938655"], "@type": ["FileFastq", "File", "Item"], "upload_key": "984e1157-0f4e-4da4-a341-04756dfea92c/4DNFIWEYQRJK.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIWEYQRJK", "display_title": "4DNFIWEYQRJK.fastq.gz", "@id": "/files-fastq/4DNFIWEYQRJK/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIWEYQRJK/@@download/4DNFIWEYQRJK.fastq.gz", "file_size": 199785999, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIWEYQRJK/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-19", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "e8b0428a-b172-4dda-9bf0-2dab1863a69e", "@id": "/quality-metrics-fastqc/e8b0428a-b172-4dda-9bf0-2dab1863a69e/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIIDSK33S/", "accession": "4DNFIIDSK33S", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIIDSK33S.fastq.gz", "paired_end": "1", "status": "released", "uuid": "aa266a67-2be3-4bb2-a055-fe570bb78cee", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938655", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938655"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "4dae0b90-0207-4693-969c-bd3307ce0c89", "dbxrefs": ["SRA:SRR5938656"], "@type": ["FileFastq", "File", "Item"], "upload_key": "4dae0b90-0207-4693-969c-bd3307ce0c89/4DNFIP5AY7H3.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIP5AY7H3", "display_title": "4DNFIP5AY7H3.fastq.gz", "@id": "/files-fastq/4DNFIP5AY7H3/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIP5AY7H3/@@download/4DNFIP5AY7H3.fastq.gz", "file_size": 180144894, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIP5AY7H3/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-19", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "d7138e23-a755-45ea-b6a6-79279de5d07c", "@id": "/quality-metrics-fastqc/d7138e23-a755-45ea-b6a6-79279de5d07c/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFI6WQ3UPR/", "accession": "4DNFI6WQ3UPR", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFI6WQ3UPR.fastq.gz", "paired_end": "2", "status": "released", "uuid": "d56bc688-1fd2-4ae4-bedb-dfd8bcfbd662", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938656", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938656"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "d56bc688-1fd2-4ae4-bedb-dfd8bcfbd662", "dbxrefs": ["SRA:SRR5938656"], "@type": ["FileFastq", "File", "Item"], "upload_key": "d56bc688-1fd2-4ae4-bedb-dfd8bcfbd662/4DNFI6WQ3UPR.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFI6WQ3UPR", "display_title": "4DNFI6WQ3UPR.fastq.gz", "@id": "/files-fastq/4DNFI6WQ3UPR/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFI6WQ3UPR/@@download/4DNFI6WQ3UPR.fastq.gz", "file_size": 202000281, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFI6WQ3UPR/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-19", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "de5e46f2-d70f-4be4-a791-bac00f47a80f", "@id": "/quality-metrics-fastqc/de5e46f2-d70f-4be4-a791-bac00f47a80f/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIP5AY7H3/", "accession": "4DNFIP5AY7H3", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIP5AY7H3.fastq.gz", "paired_end": "1", "status": "released", "uuid": "4dae0b90-0207-4693-969c-bd3307ce0c89", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938656", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938656"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "631f55f6-b6bd-4c84-b56b-3617b8207510", "dbxrefs": ["SRA:SRR5938657"], "@type": ["FileFastq", "File", "Item"], "upload_key": "631f55f6-b6bd-4c84-b56b-3617b8207510/4DNFIOJ9DB1U.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIOJ9DB1U", "display_title": "4DNFIOJ9DB1U.fastq.gz", "@id": "/files-fastq/4DNFIOJ9DB1U/", "paired_end": "1", "status": "released", "href": "/files-fastq/4DNFIOJ9DB1U/@@download/4DNFIOJ9DB1U.fastq.gz", "file_size": 201520314, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIOJ9DB1U/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "8d3fc56d-0f42-4e31-b59b-3dab20b2bb4f", "@id": "/quality-metrics-fastqc/8d3fc56d-0f42-4e31-b59b-3dab20b2bb4f/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIX8DEWO3/", "accession": "4DNFIX8DEWO3", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIX8DEWO3.fastq.gz", "paired_end": "2", "status": "released", "uuid": "df7e6085-8326-454f-8b7b-46a64f80317b", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938657", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938657"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"uuid": "df7e6085-8326-454f-8b7b-46a64f80317b", "dbxrefs": ["SRA:SRR5938657"], "@type": ["FileFastq", "File", "Item"], "upload_key": "df7e6085-8326-454f-8b7b-46a64f80317b/4DNFIX8DEWO3.fastq.gz", "file_classification": "raw file", "file_type": "reads", "accession": "4DNFIX8DEWO3", "display_title": "4DNFIX8DEWO3.fastq.gz", "@id": "/files-fastq/4DNFIX8DEWO3/", "paired_end": "2", "status": "released", "href": "/files-fastq/4DNFIX8DEWO3/@@download/4DNFIX8DEWO3.fastq.gz", "file_size": 203243527, "file_type_detailed": "reads (fastq)", "quality_metric": {"url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIX8DEWO3/fastqc_report.html", "display_title": "QualityMetricFastqc from 2018-11-14", "overall_quality_status": "PASS", "Sequence length": "50", "Total Sequences": 4000000, "uuid": "8e138a95-e332-4240-a9c5-00c5c637d209", "@id": "/quality-metrics-fastqc/8e138a95-e332-4240-a9c5-00c5c637d209/", "status": "released", "@type": ["QualityMetricFastqc", "QualityMetric", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "related_files": [{"relationship_type": "paired with", "file": {"@id": "/files-fastq/4DNFIOJ9DB1U/", "accession": "4DNFIOJ9DB1U", "file_type": "reads", "file_type_detailed": "reads (fastq)", "display_title": "4DNFIOJ9DB1U.fastq.gz", "paired_end": "1", "status": "released", "uuid": "631f55f6-b6bd-4c84-b56b-3617b8207510", "@type": ["FileFastq", "File", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "file_format": {"display_title": "fastq", "@type": ["FileFormat", "Item"], "uuid": "c13d06cf-218e-4f61-aaf0-91f226248b2c", "@id": "/file-formats/fastq/", "status": "released", "file_format": "fastq", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "external_references": [{"ref": "SRA:SRR5938657", "uri": "https://www.ncbi.nlm.nih.gov/sra/?term=SRR5938657"}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "status": "released", "aliases": ["4dn-dcic-lab:GSM2745844"], "dbxrefs": ["GEO:GSM2745844"], "protocol": {"display_title": "GSE102740_hic_protocol.pdf", "@type": ["Protocol", "Item"], "uuid": "e89ce7e7-92ba-4af4-b910-74b269c0e845", "@id": "/protocols/e89ce7e7-92ba-4af4-b910-74b269c0e845/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "accession": "4DNEXYC9JO8X", "biosample": {"biosource_summary": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "@id": "/biosamples/4DNBS2QXQVZ6/", "uuid": "1a038ba8-aa43-4361-bd44-283ea1740cda", "status": "released", "modifications_summary": "None", "biosample_type": "immortalized cells", "display_title": "4DNBS2QXQVZ6", "@type": ["Biosample", "Item"], "accession": "4DNBS2QXQVZ6", "treatments_summary": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h) and nocodazole treatment (0.5 \u03bcg/mL)", "biosource": [{"lab": {"display_title": "Job Dekker, UMMS", "status": "current", "@type": ["Lab", "Item"], "@id": "/labs/job-dekker-lab/", "uuid": "3c577664-affb-41c4-bf27-9e21c2fc1554", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin", "submits_for.3c577664-affb-41c4-bf27-9e21c2fc1554"]}}, "award": {"status": "current", "@type": ["Award", "Item"], "display_title": "EXTERNAL AWARD", "@id": "/awards/external-award/", "uuid": "12a92962-8265-4fc0-b2f8-cf14f05db58b", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "status": "released", "tissue": {"display_title": "bursa of Fabricius", "term_name": "bursa of Fabricius", "status": "released", "term_id": "UBERON:0003903", "@type": ["OntologyTerm", "Item"], "uuid": "1bfd1088-3311-4711-8c41-83dbed3db972", "@id": "/ontology-terms/UBERON:0003903/", "preferred_name": "bursa of Fabricius", "slim_terms": [{"display_title": "digestive system", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/UBERON:0001007/", "status": "released", "uuid": "111129bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"display_title": "mesoderm", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/UBERON:0000926/", "status": "released", "uuid": "111120bc-8535-4448-903e-854af460a233", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "aliases": ["4dn-dcic-lab:DT40-Cdk1as"], "accession": "4DNSRFB455CY", "cell_line": {"uuid": "fd057734-0765-4007-b7eb-d71ac7cbef65", "term_name": "DT40", "term_id": "EFO:0006274", "@type": ["OntologyTerm", "Item"], "slim_terms": [{"display_title": "cell", "uuid": "72e16a19-eef3-46ca-a1b8-20e646e69675", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/GO:0005623/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"display_title": "cell", "uuid": "45d2b02e-130b-40db-8bf2-2288c6c57dcf", "@type": ["OntologyTerm", "Item"], "@id": "/ontology-terms/CL:0000000/", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "@id": "/ontology-terms/EFO:0006274/", "display_title": "DT40", "preferred_name": "DT40", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "individual": {"display_title": "4DNINYWTTO3D", "status": "released", "uuid": "836856fd-a0f7-4daf-afb2-4a098df8e8fc", "@type": ["IndividualChicken", "Individual", "Item"], "@id": "/individuals-chicken/4DNINYWTTO3D/", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "DT40 line expressing Cdk1as transgene, which renders it sensitive to inhibition by 1NM-PP1", "date_created": "2018-10-30T15:04:12.407677+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T22:24:13.955875+00:00"}, "modifications": [{"status": "released", "display_title": "random integration of X. laevis Cdk1", "@id": "/modifications/4dca1ddb-ab74-44f5-ac84-738b0198886d/", "uuid": "4dca1ddb-ab74-44f5-ac84-738b0198886d", "@type": ["Modification", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"status": "released", "display_title": "Crispr disruption for CDK1 chicken gene", "@id": "/modifications/fb27fdf6-4199-4179-8bb0-6101b1404aee/", "uuid": "fb27fdf6-4199-4179-8bb0-6101b1404aee", "@type": ["Modification", "Item"], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "biosource_type": "immortalized cell line", "cell_line_tier": "Unclassified", "public_release": "2019-10-11", "schema_version": "2", "project_release": "2019-10-11", "@id": "/biosources/4DNSRFB455CY/", "@type": ["Biosource", "Item"], "uuid": "bdb9d92e-1f52-4e84-a484-78e595791e5e", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption - 4DNSRFB455CY", "external_references": [], "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "biosource_category": ["Other"], "organism": {"@type": ["Organism", "Item"], "display_title": "G. gallus", "status": "released", "@id": "/organisms/9031/", "uuid": "fed8c206-762f-497f-821b-1c8ff7900bd2", "name": "chicken", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "badges": [{"messages": ["Biosample missing Cell Culture Details"], "badge": {"description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group.", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "badge_icon": "/static/img/badges/biosample-icon.svg", "title": "Biosample Metadata Incomplete", "display_title": "Biosample Metadata Incomplete", "@id": "/badges/biosample-metadata-incomplete/", "badge_classification": "Warning", "@type": ["Badge", "Item"], "warning": "Biosample Metadata Incomplete", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}}], "treatments": [{"display_title": "1NM-PP1 treatment (2.0 \u03bcM, 10.0h)", "duration_units": "hour", "chemical": "1NM-PP1", "@type": ["TreatmentAgent", "Treatment", "Item"], "description": "Synchronization with 1NM-PP1 fo 10 hours", "treatment_type": "Chemical", "concentration": 2.0, "@id": "/treatments-agent/6600f226-5817-4bb8-afb5-c412a7b39058/", "concentration_units": "\u03bcM", "duration": 10.0, "uuid": "6600f226-5817-4bb8-afb5-c412a7b39058", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, {"display_title": "nocodazole treatment (0.5 \u03bcg/mL)", "chemical": "nocodazole", "@type": ["TreatmentAgent", "Treatment", "Item"], "description": "Nocodazole treatment for prometaphase block", "treatment_type": "Chemical", "concentration": 0.5, "@id": "/treatments-agent/cfce7629-46e6-4edd-8496-bd727b51e98f/", "concentration_units": "\u03bcg/mL", "uuid": "cfce7629-46e6-4edd-8496-bd727b51e98f", "status": "released", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "description": "90PMphase-30m-R2", "sop_mapping": {"has_sop": "No"}, "date_created": "2018-10-30T15:05:06.869779+00:00", "submitted_by": {"error": "no view permissions"}, "last_modified": {"modified_by": {"error": "no view permissions"}, "date_modified": "2019-10-11T20:55:23.812420+00:00"}, "ligation_time": 240.0, "biotin_removed": "Yes", "digestion_time": 960.0, "public_release": "2019-10-11", "schema_version": "2", "tagging_method": "biotin-dCTP", "experiment_type": {"experiment_category": "Sequencing", "@id": "/experiment-types/dilution-hi-c/", "uuid": "832b7989-69ab-4bb6-97b9-195d5dd965ea", "display_title": "Dilution Hi-C", "@type": ["ExperimentType", "Item"], "title": "Dilution Hi-C", "status": "released", "assay_subclass_short": "Hi-C", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "processed_files": [{"upload_key": "fae4b505-5063-49b8-937b-97cf8e7b4bda/4DNFIN8GZ9Z6.bam", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/fae4b505-5063-49b8-937b-97cf8e7b4bda/4DNFIN8GZ9Z6.bam", "uuid": "fae4b505-5063-49b8-937b-97cf8e7b4bda", "file_format": {"display_title": "bam", "@id": "/file-formats/bam/", "status": "released", "file_format": "bam", "@type": ["FileFormat", "Item"], "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b3c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "display_title": "4DNFIN8GZ9Z6.bam", "accession": "4DNFIN8GZ9Z6", "file_size": 13462660925, "file_type_detailed": "alignments (bam)", "href": "/files-processed/4DNFIN8GZ9Z6/@@download/4DNFIN8GZ9Z6.bam", "file_classification": "processed file", "@type": ["FileProcessed", "File", "Item"], "file_type": "alignments", "status": "released", "@id": "/files-processed/4DNFIN8GZ9Z6/", "quality_metric": {"@type": ["QualityMetricBamqc", "QualityMetric", "Item"], "display_title": "QualityMetricBamqc from 2020-01-16", "status": "released", "@id": "/quality-metrics-bamqc/722ae886-98ae-493b-a254-3b50bca0d412/", "uuid": "722ae886-98ae-493b-a254-3b50bca0d412", "overall_quality_status": "PASS", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "quality_metric_summary": [{"title": "Total Reads", "value": "132819739", "numberType": "integer"}, {"title": "Unmapped Reads", "value": "20.995", "tooltip": "Percent of total reads (=27.88m)", "numberType": "percent"}, {"title": "Multimapped Reads", "value": "9.424", "tooltip": "Percent of total reads (=12.52m)", "numberType": "percent"}, {"title": "Duplicate Reads", "value": "32.089", "tooltip": "Percent of total reads (=42.62m)", "numberType": "percent"}, {"title": "Walks", "value": "0.004", "tooltip": "Percent of total reads (=0.0m)", "numberType": "percent"}, {"title": "Minor Contigs", "value": "0.226", "tooltip": "Percent of total reads (=0.3m)", "numberType": "percent"}]}, "external_references": [], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "prometaphase block (30m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}}, {"upload_key": "49d5af7f-abc6-4632-add2-070aadbfdcee/4DNFIEQYG26N.pairs.gz", "open_data_url": "https://4dn-open-data-public.s3.amazonaws.com/fourfront-webprod/wfoutput/49d5af7f-abc6-4632-add2-070aadbfdcee/4DNFIEQYG26N.pairs.gz", "uuid": "49d5af7f-abc6-4632-add2-070aadbfdcee", "file_format": {"display_title": "pairs", "@id": "/file-formats/pairs/", "status": "released", "file_format": "pairs", "@type": ["FileFormat", "Item"], "uuid": "d13d06cf-218e-4f61-aaf0-91f226248b2c", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "display_title": "4DNFIEQYG26N.pairs.gz", "accession": "4DNFIEQYG26N", "file_size": 918441205, "file_type_detailed": "contact list-replicate (pairs)", "href": "/files-processed/4DNFIEQYG26N/@@download/4DNFIEQYG26N.pairs.gz", "file_classification": "processed file", "@type": ["FileProcessed", "File", "Item"], "file_type": "contact list-replicate", "status": "released", "@id": "/files-processed/4DNFIEQYG26N/", "quality_metric": {"@type": ["QualityMetricPairsqc", "QualityMetric", "Item"], "display_title": "QualityMetricPairsqc from 2019-02-11", "url": "https://s3.amazonaws.com/elasticbeanstalk-fourfront-webprod-wfoutput/4DNFIEQYG26N/pairsqc_report.html", "status": "released", "@id": "/quality-metrics-pairsqc/5875872c-dbce-4480-8786-3088856560a5/", "Total reads": 49793149, "uuid": "5875872c-dbce-4480-8786-3088856560a5", "overall_quality_status": "PASS", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "quality_metric_summary": [{"title": "Filtered Reads", "value": "49793149", "numberType": "integer"}, {"title": "Cis reads (>20kb)", "value": "70.03", "tooltip": "Percent of filtered reads (=34.87m)", "numberType": "percent"}, {"title": "Short cis reads", "value": "22.06", "tooltip": "Percent of filtered reads (=10.98m)", "numberType": "percent"}, {"title": "Trans Reads", "value": "7.91", "tooltip": "Percent of filtered reads (=3.94m)", "numberType": "percent"}]}, "external_references": [], "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "track_and_facet_info": {"experimental_lab": "Job Dekker, UMMS", "experiment_type": "Dilution Hi-C", "experiment_bucket": "processed file", "assay_info": "HindIII", "dataset": "HiC on sync. chicken cells", "condition": "prometaphase block (30m)", "replicate_info": "Biorep 1, Techrep 1", "biosource_name": "DT40 with random integration of X. laevis Cdk1, CDK1 disruption", "lab_name": "4DN DCIC, HMS"}}], "project_release": "2019-10-11", "digestion_enzyme": {"uuid": "2ace2f00-c913-4bac-a6ef-0b316bc2108e", "@type": ["Enzyme", "Item"], "@id": "/enzymes/HindIII/", "display_title": "HindIII", "status": "released", "name": "HindIII", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "crosslinking_time": 10.0, "biosample_quantity": 30000000.0, "crosslinking_method": "1% Formaldehyde", "fragment_size_range": "150-350", "fragmentation_method": "sonication", "ligation_temperature": 16.0, "digestion_temperature": 37.0, "biosample_quantity_units": "cells", "crosslinking_temperature": 23.0, "library_preparation_date": "2014-01-31", "fragment_size_selection_method": "SPRI beads", "@id": "/experiments-hi-c/4DNEXYC9JO8X/", "@type": ["ExperimentHiC", "Experiment", "Item"], "uuid": "67b6b6c7-d918-4e4c-aefa-d348b71afba9", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}, "display_title": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII - 4DNEXYC9JO8X", "external_references": [{"ref": "GEO:GSM2745844", "uri": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2745844"}], "experiment_sets": [{"status": "released", "@type": ["ExperimentSetReplicate", "ExperimentSet", "Item"], "uuid": "26dbd96f-996c-44c5-b7e1-a328c2ecc76c", "accession": "4DNEST1YQMVS", "display_title": "4DNEST1YQMVS", "@id": "/experiment-set-replicates/4DNEST1YQMVS/", "experimentset_type": "replicate", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "produced_in_pub": {"journal": "Science (New York, N.Y.)", "display_title": "Gibcus JH et al. (2018) PMID:29348367", "@type": ["Publication", "Item"], "abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "short_attribution": "Gibcus JH et al. (2018)", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "title": "A pathway for mitotic chromosome formation.", "date_published": "2018-02-09", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "status": "current", "ID": "PMID:29348367", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}, "publications_of_exp": [{"abstract": "Mitotic chromosomes fold as compact arrays of chromatin loops. To identify the pathway of mitotic chromosome formation, we combined imaging and Hi-C analysis of synchronous DT40 cell cultures with polymer simulations. Here we show that in prophase, the interphase organization is rapidly lost in a condensin-dependent manner, and arrays of consecutive 60-kilobase (kb) loops are formed. During prometaphase, ~80-kb inner loops are nested within ~400-kb outer loops. The loop  array acquires a helical arrangement with consecutive loops emanating from a central \"spiral staircase\" condensin scaffold. The size of helical turns progressively increases to ~12 megabases during prometaphase. Acute depletion of  condensin I or II shows that nested loops form by differential action of the two  condensins, whereas condensin II is required for helical winding.", "title": "A pathway for mitotic chromosome formation.", "journal": "Science (New York, N.Y.)", "date_published": "2018-02-09", "@id": "/publications/84fa5633-aac7-4cb3-b53b-0f0234ea06dd/", "authors": ["Gibcus JH", "Samejima K", "Goloborodko A", "Samejima I", "Naumova N", "Nuebler J", "Kanemaki MT", "Xie L", "Paulson JR", "Earnshaw WC", "Mirny LA", "Dekker J"], "short_attribution": "Gibcus JH et al. (2018)", "status": "current", "@type": ["Publication", "Item"], "ID": "PMID:29348367", "display_title": "Gibcus JH et al. (2018) PMID:29348367", "uuid": "84fa5633-aac7-4cb3-b53b-0f0234ea06dd", "principals_allowed": {"view": ["system.Everyone"], "edit": ["group.admin"]}}], "experiment_categorizer": {"field": "Enzyme", "value": "HindIII", "combined": "Enzyme: HindIII"}, "experiment_summary": "Dilution Hi-C on DT40 with random integration of X. laevis Cdk1, CDK1 disruption with HindIII", "@context": "/terms/", "aggregated-items": {"badges": [{"parent": "/biosamples/4DNBS2QXQVZ6/", "embedded_path": "biosample.badges", "item": {"messages": ["Biosample missing Cell Culture Details"], "badge": {"commendation": null, "warning": "Biosample Metadata Incomplete", "uuid": "2b2cc7ff-b7a8-4138-9a6c-22884fc71690", "@id": "/badges/biosample-metadata-incomplete/", "badge_icon": "/static/img/badges/biosample-icon.svg", "description": "Biosample is missing metadata information required as part of the standards implemented by the 4DN Samples working group."}}}]}, "validation-errors": []}