36241 Results
Included Properties
Data Type
Project
Experiment Type
Assay Details
Biosource
File Properties
File Type
File Format
File Size
Generating Lab
Experimental Lab
Input of Workflow
Output of Workflow
Type
experimentset_type
Status
2 Common Properties
Commendations
No value
Warnings
No value
Title
Type
Experiment Type
Dataset
Condition
Assay Details
Biosource
File Type
File Format
In experiment as
Replicate info
Generating Lab
Experimental Lab
File Size
Experiment Set
FileProcessed
multiplexed FISH
Chromatin Tracing of Sox2 and SE with engineered CTCF insertions
4 CTCF sites inserted downstream of both Sox2 and SE with Sox2 RNA FISH
42 consecutive 5-kb loci on chr3 (mouse), Chromosomes, Sox2 mouse transcript, GFP transcript, mCherry transcript
F123-CASTx129 with Sox2 tags and RMCE site downstream of Sox2 SE
FOF-CT - Trace Data
csv
processed file
Biorep 1, Techrep 1
39.68 kB
FileProcessed
multiplexed FISH
Chromatin Tracing of Sox2 and SE with engineered CTCF insertions
4 CTCF sites inserted between Sox2 and SE with Sox2 RNA FISH
42 consecutive 5-kb loci on chr3 (mouse), Chromosomes, Sox2 mouse transcript, GFP transcript, mCherry transcript
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
FOF-CT - Trace Data
csv
processed file
Biorep 1, Techrep 1
74.59 kB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
regular AluGG mgRNA - 3h
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
891.35 MB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
regular AluGG mgRNA - 3h
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
1.21 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - no light control
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
1.03 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - no light control
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
1.26 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - 10 minute post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
1.09 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - 10 minute post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
1.24 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - 30 minute post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
1.02 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
light activated caged mgRNA - 30 minute post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
1002.47 MB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 1 h post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
1.02 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 1 h post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
885.22 MB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 2 h post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
981.69 MB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 2 h post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
837.45 MB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 4 h post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
1.08 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - 4 h post light
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
1.05 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - no light control
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
1.37 GB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
photocleavable mgRNA - no light control
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
1016.21 MB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
no treatment control
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 2, Techrep 1
963.35 MB
FileProcessed
ATAC-seq
ATAC-Seq on HEK293 cells after multi-target Crispr
no treatment control
-
HEK293 (Tier 2)
Read Positions
bed
processed file
Biorep 1, Techrep 1
964.79 MB
FileFastq
in situ Hi-C
Hi-C on hamster OSNs
inactivated SARS-Cov2 infected serum - 12.5h
MseI
olfactory receptor cell
Reads
fastq
raw file
Biorep 3, Techrep 1
4.42 GB
-
FileFastq
in situ Hi-C
Hi-C on hamster OSNs
inactivated SARS-Cov2 infected serum - 12.5h
MseI
olfactory receptor cell
Reads
fastq
raw file
Biorep 3, Techrep 1
4.35 GB
-
FileFastq
in situ Hi-C
Hi-C on hamster OSNs
inactivated SARS-Cov2 infected serum - 12.5h
MseI
olfactory receptor cell
Reads
fastq
raw file
Biorep 2, Techrep 1
1.92 GB
-
FileFastq
in situ Hi-C
Hi-C on hamster OSNs
inactivated SARS-Cov2 infected serum - 12.5h
MseI
olfactory receptor cell
Reads
fastq
raw file
Biorep 2, Techrep 1
1.91 GB
-
FileFastq
in situ Hi-C
Hi-C on hamster OSNs
inactivated SARS-Cov2 infected serum - 12.5h
MseI
olfactory receptor cell
Reads
fastq
raw file
Biorep 1, Techrep 1
12.12 GB
-