Included Properties
Data Type
Project
Lab
Experiment Type
Dataset
Organism
Sample Type
Sample Tier
Sample Category
Sample
Organ/System
Tissue Source
Publication
Modifications
Treatments
Assay Details
Center
Status
Commendations
Warnings
2 Common Properties
Experiment Category
Sequencing
Set Type
Replicate
335 Results
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
olfactory receptor cell
Hi-C on hamster OSNs
inactivated SARS-Cov2 infected serum - 12.5h
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on hamster OSNs
mock serum
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on hamster OSNs
SARS-Cov2 infected - 10 dpi
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on hamster OSNs
SARS-Cov2 infected - 1 dpi
Enzyme
MseI
in situ Hi-C
HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G)
Hi-C on HCT116
WAPL KD
Enzyme
Arima - A1, A2
in situ Hi-C
HCT116 with Crispr generated mClover and AID-tagged WAPL, AAVS1-OsTIR1(F74G)
Hi-C on HCT116
wild-type
Enzyme
Arima - A1, A2
in situ Hi-C
H1-hESC (Tier 1)
Hi-C on H1 cells
Flavopiridol
Enzyme
Arima - A1, A2
in situ Hi-C
H1-hESC (Tier 1)
Hi-C on H1 cells
Ammonium acetate
Enzyme
Arima - A1, A2
in situ Hi-C
H1-hESC (Tier 1)
Hi-C on H1 cells
No treatment control
Enzyme
Arima - A1, A2
in situ Hi-C
Sertoli cell
Hi-C on mouse somatic gonadal cells
male Sertoli cells
Enzyme
Arima - A1, A2
in situ Hi-C
granulosa cell
Hi-C on mouse somatic gonadal cells
female granulosa cells
Enzyme
Arima - A1, A2
in situ Hi-C
olfactory receptor cell
Hi-C on hamster OSNs
SARS-Cov2 infected - 3dpi
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on hamster OSNs
control
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on human OSNs
SARS-Cov2 infected
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on human OSNs
SARS-Cov2 infected
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on human OSNs
SARS-Cov2 infected
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on human OSNs
SARS-Cov2 infected
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on human OSNs
control
Enzyme
MseI
in situ Hi-C
olfactory receptor cell
Hi-C on human OSNs
control
Enzyme
MseI
in situ Hi-C
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
Hi-C on Sox2 tagged F123 cells
4 CTCF site region between Sox2 and SE
Enzyme
MboI
in situ Hi-C
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
Hi-C on Sox2 tagged F123 cells
2 CTCF site region between Sox2 and SE
Enzyme
MboI
in situ Hi-C
H1-hESC
Hi-C on H1 cells - protocol variations
Enzyme HindIII - in situ Hi-C on cells cultured prior to 4DN SOP
Enzyme
HindIII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde, DpnII
Enzyme
DpnII
in situ Hi-C
HFF-hTERT
Hi-C on HFF cells - protocol variations
Formaldehyde, DdeI
Enzyme
DdeI