Search for ExperimentSetReplicate

Included Properties

Data Type
  • ExperimentSetReplicate7
    • Project
    Lab
    Experiment Type
  • FISH
  • multiplexed FISH7
    • Dataset
    Organism
    Sample Type
    Sample Category
    Sample
    Organ/System
    Tissue Source
    Publication
    Modifications
    Assay Details
    Center
    Status
  • Released7
    • Warnings
    5 Common Properties
     Experiment Category
    Microscopy
     Sample Tier
    Unclassified
     Treatments
    No value
     Set Type
    Replicate
     Commendations
    No value
    7 Results
    Title
    Experiment Type
    Biosample
    Dataset
    Condition
    Assay Details
    Lab
    4DNESNEKOCAP
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site downstream of Sox2 SE
    Chromatin Tracing of Sox2 and SE with engineered CTCF insertions
    4 CTCF sites inserted downstream of both Sox2 and SE with Sox2 RNA FISH
    Target
    42 consecutive 5-kb loci on chr3 (mouse), Chromosomes, Sox2 mouse transcript, GFP transcript, mCherry transcript
    Bing Ren, UCSD
    4DNESC5PKTQ9
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
    Chromatin Tracing of Sox2 and SE with engineered CTCF insertions
    4 CTCF sites inserted between Sox2 and SE with Sox2 RNA FISH
    Target
    42 consecutive 5-kb loci on chr3 (mouse), Chromosomes, Sox2 mouse transcript, GFP transcript, mCherry transcript
    Bing Ren, UCSD
    4DNESOXQX1JT
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
    Chromatin Tracing of Sox2 and SE with engineered CTCF insertions
    4 mutant CTCF sites inserted between Sox2 and SE
    Target
    42 consecutive 5-kb loci on chr3 (mouse), Chromosomes
    Bing Ren, UCSD
    4DNES51KSIZ9
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site downstream of Sox2 SE
    Chromatin Tracing of Sox2 and SE with engineered CTCF insertions
    4 CTCF sites inserted downstream of both Sox2 and SE
    Target
    42 consecutive 5-kb loci on chr3 (mouse), Chromosomes
    Bing Ren, UCSD
    4DNESIGBIXQS
    multiplexed FISH
    F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
    Chromatin Tracing of Sox2 and SE with engineered CTCF insertions
    4 CTCF sites inserted between Sox2 and SE
    Target
    42 consecutive 5-kb loci on chr3 (mouse), Chromosomes
    Bing Ren, UCSD
    4DNESQN4JCAS
    multiplexed FISH
    GM23248
    Super-resolution imaging of chromosome walks
    8 Mb walks on chr19
    Target
    22 genomic regions
    Chao-Ting Wu, HARVARD
    4DNESXYFBZMI
    multiplexed FISH
    liver
    Chromatin tracing in mammalian tissue
    Fetal mouse liver
    Target
    55 RNAs from fetal liver marker genes and 82 RNAs from genes on chr19 (mouse), 19 consecutive 5-kb loci on chr19 (mouse), 50 TADs on chr19 (mouse), Chromosomes, Cell membrane, Nucleolus
    Siyuan Wang, YALE
    - fin -